Sequence of DPV Lily mottle virus
Lily mottle virus isolate LMoV-Li helper component proteinase mRNA, partial cds.
ACC No: JQ710692
Dated: 2012-05-21 | Length: 1373 | CRC: -400772747
ID JQ710692; SV 1; linear; mRNA; STD; VRL; 1373 BP.
XX
AC JQ710692;
XX
DT 21-MAY-2012 (Rel. 112, Created)
DT 21-MAY-2012 (Rel. 112, Last updated, Version 1)
XX
DE Lily mottle virus isolate LMoV-Li helper component proteinase mRNA, partial
DE cds.
XX
KW .
XX
OS Lily mottle virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1373
RA Suh E.-J., Lee S.-K., Kim D.-H., Jeong M.-J., Chang A.-C., Chung B.-N.;
RT "Construction of broad-spectrum resistance vector against RNA viruses in
RT lily";
RL Unpublished.
XX
RN [2]
RP 1-1373
RA Suh E.-J., Lee S.-K., Kim D.-H., Jeong M.-J., Chang A.-C., Chung B.-N.;
RT ;
RL Submitted (23-FEB-2012) to the INSDC.
RL Bio-crop Development Division, National Academy of Agricultural Science,
RL 150 Suin-Ro Kweonseonku, Suwon, Gyunggi-do 441-707, South Korea
XX
FH Key Location/Qualifiers
FH
FT source 1. .1373
FT /organism="Lily mottle virus"
FT /host="Lilium X fomolongi"
FT /isolate="LMoV-Li"
FT /mol_type="mRNA"
FT /country="South Korea:Suwon"
FT /collection_date="27-May-2009"
FT /db_xref="taxon:32624"
FT CDS <1. .>1373
FT /codon_start=3
FT /product="helper component proteinase"
FT /protein_id="AFJ95890.1"
FT /translation="GPGDKFWAGFNSQFLRIKPKEIPHTCTSNFNVFECGQVAALVCQA
FT LYPCGRITCQQCASEYLELTKVELGEKLSDGLYRTSSQIRENHQEFAHVAHMLTVIADL
FT LSLKNNNMEAFTEVHKLIGEQTQSPFTHLNRLNSILIKGSDMNSNELYECSDCIRELAR
FT FQKNRTDNIKKLDVSVFRNKASSKSYFNLDLMCDNQLDKNGNFEWGQRGYHAKRFLSNY
FT FEVVNTQNAYREHTLRKHPNGTRELAIGKFIVSTNFEVFRKSMEGKRIPQMPVTEACLS
FT QRGERFIYQCCCVTNEDGTPLESTFKMPTKNTLVLGNTGDEKFVDMPTDTDEKMYIARE
FT GYCYINIFFAMLINVRESQAKAFTKMVRDRLVPELGTWPTMIDVATACHTLTVFFPDTL
FT SAELPRILVDHNTKTMHVIDSYGSVSTGYHQLKANTVSQLVLFASDTLKSEMKHYQVG"
XX
SQ Sequence 1373 BP; 416 A; 333 C; 328 G; 296 T; 0 other;
jq710692 Length: 1373 21-MAY-2012 Type: N Check: 1448 ..
1 cgggcccagg cgataaattc tgggcaggat tcaactccca attcctcagg
51 atcaaaccca aggaaatacc acacacatgc acatcaaact tcaacgtctt
101 cgagtgtgga caggtcgcgg ctcttgtgtg ccaagcactg tacccatgtg
151 ggagaattac atgtcaacag tgtgcgtccg agtatctgga gctgacgaag
201 gtagaactcg gggaaaagct cagcgatggt ttgtacagaa cgagttcgca
251 aattcgtgaa aaccaccaag aattcgccca tgtggcacac atgctcactg
301 tgatagctga tcttctgagc ctcaagaaca acaacatgga ggcgttcaca
351 gaagtccaca aactcatagg tgagcaaaca cagtcaccat tcacacacct
401 caatcgctta aattcaatac tgatcaaagg cagcgatatg aacagcaatg
451 agctgtatga atgttcagac tgcattcgtg agctagcgcg attccagaaa
501 aacaggacag ataacatcaa gaaactggac gttagcgtgt ttcggaataa
551 agcatcctcc aagtcatatt tcaacctgga cttgatgtgt gacaaccaac
601 ttgacaagaa tggaaatttc gaatggggcc agcgaggcta tcatgccaaa
651 cggttcttat cgaattattt tgaggttgtc aacacacaga atgcctaccg
701 agagcacaca ctgaggaagc atccgaatgg cacgcgagag ctcgcaattg
751 ggaaatttat agtgtcaaca aactttgaag tgtttcgcaa gagcatggaa
801 gggaagcgca taccacaaat gcctgttact gaggcttgcc tgagtcagcg
851 tggagagcgt ttcatttacc agtgctgctg cgtgacaaac gaagatggca
901 ctccactcga gtcgacattc aaaatgccaa cgaagaacac actcgtgctt
951 gggaacacgg gtgacgagaa atttgtcgac atgcccaccg acacggatga
1001 gaagatgtat atagctcgag agggctattg ctacatcaac atatttttcg
1051 ccatgctaat aaacgttcgt gaaagtcaag caaaggcatt cacgaagatg
1101 gtgcgagacc gcctcgtgcc cgagcttgga acatggccaa ccatgatcga
1151 tgtggcaaca gcatgccaca cactgactgt cttcttccca gacacactga
1201 gcgcagaact cccgcgaatt ctcgtggacc acaacactaa gacgatgcat
1251 gtgattgact catacggatc tgttagcact ggctaccacc agttgaaggc
1301 taacacagtg agtcagctag tcctctttgc tagtgatacg ctgaagtcag
1351 aaatgaagca ctaccaggtc ggc