Sequence of DPV Jacquemontia mosaic Yucatan virus
Jacquemontia mosaic Yucatan virus segment DNA-B, complete sequence.
ACC No: JQ821387
Dated: 2012-06-19 | Length: 2591 | CRC: -642829113
ID JQ821387; SV 1; circular; genomic DNA; STD; VRL; 2591 BP.
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AC JQ821387;
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DT 19-JUN-2012 (Rel. 113, Created)
DT 19-JUN-2012 (Rel. 113, Last updated, Version 1)
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DE Jacquemontia mosaic Yucatan virus segment DNA-B, complete sequence.
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KW .
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OS Jacquemontia mosaic Yucatan virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
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RN [1]
RP 1-2591
RA Torres-Herrera I., Cardenas-Conejo Y., Ambriz-Granados S.,
RA Moreno-Valenzuela O., Arguello-Astorga G.R.;
RT "Jacquemontia mosaic Yucatan virus, a new begomovirus of the SLCV Clade";
RL Unpublished.
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RN [2]
RP 1-2591
RA Torres-Herrera I., Cardenas-Conejo Y., Ambriz-Granados S.,
RA Moreno-Valenzuela O., Arguello-Astorga G.R.;
RT ;
RL Submitted (26-MAR-2012) to the INSDC.
RL Molecular Biology of Plants, Instituto Potosino de investigacion Cientifica
RL y Tecnologica (IPICYT), Camino a la Presa San Jose 2055. Col. Lomas 4
RL seccion, San Luis Potosi 78216, Mexico
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FH Key Location/Qualifiers
FH
FT source 1. .2591
FT /organism="Jacquemontia mosaic Yucatan virus"
FT /segment="DNA-B"
FT /host="Jacquemontia pentantha"
FT /mol_type="genomic DNA"
FT /country="Mexico:Yucatan, Merida"
FT /collection_date="2007"
FT /db_xref="taxon:1198450"
FT gene 380. .1150
FT /gene="BV1"
FT CDS 380. .1150
FT /codon_start=1
FT /gene="BV1"
FT /product="nuclear shuttle protein"
FT /note="nuclear transporter; nuclear import/export of viral
FT DNA; BV1; BR1; NSP"
FT /protein_id="AFM38723.1"
FT /translation="MYAYRYKRGAATTQRPYYSRNNAVKRSYPAKRFNVKRYPVSSRKA
FT HEEPKMVSQRIQENQYGPEFTMAHNSAISTYISYPGMGKTLPNRSRSYIKLRRLRFKGT
FT VKIERVTSDMNIDGSVPKVEGVLSIVIVVDRKPHLSASGRLHTFDELFGALIHSHGTLS
FT ITPSLKDRFYIRHVCKRVLSVEKDSTIVEVEGSTSLSNRRYNMWSMFRDLEHDTCKGVY
FT DNISKNALLVYYCWMSDVMSKASPFVSFDLDYLG"
FT gene complement(1222. .2097)
FT /gene="BC1"
FT CDS complement(1222. .2097)
FT /codon_start=1
FT /gene="BC1"
FT /product="movement protein"
FT /note="plasmodesmata-associated protein, involved in virus
FT cell-to-cell movement; MP; BC1; BL1"
FT /protein_id="AFM38724.1"
FT /translation="MDSQLANPPNAFNYIESHREEYQLSHDLTEIVLQFPSAASQFSAR
FT LSRSCMKIDHCVIEYRQQVPINAAGTVIVEIHDMRMTQNESLQAKWTFPIRCNIDLHYF
FT SASFFSLKDEIPWKLYYRVCDTNVQQRTHFAKFKGKLKLSTAKHSVDIPFKPPTVKILS
FT KQFSDKDVDFSHVDYGRWERKLIRCASMSGVGLRGPIQIRPGETWASRSTLGVSNSDAQ
FT SEVESALHPYRHLNRLEGNVLDPGESASMVGAQRAESNITMSVAQLNELVRKTVQECIN
FT TNCTPSQPKH"
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SQ Sequence 2591 BP; 684 A; 507 C; 589 G; 811 T; 0 other;
jq821387 Length: 2591 19-JUN-2012 Type: N Check: 8305 ..
1 accggatggc cgcgctgggc gtcccctgtc cgtacagtgg tcccctacag
51 ctgttccgca ctattgggta gattttgtac ttggaacacg tggcgctctg
101 tatggccttg ctcagaatta gtggcacgtc tttctatgtg tatgctttaa
151 tttaaaattc gaacagtttc ccgggttgtt taacagtgtc ccattgaata
201 gggaaagacg tggcatttct ttccccatcg ctctgagtca agttaacatt
251 tatgactcct cactttatgt ataaattgca gatgaagtat ttgtgttacg
301 caacttgact catataacca ccacgtttat gttatatact ttagaaattg
351 tgtagtcata tatagttttt tgtttgacaa tgtatgctta taggtataaa
401 cgtggagctg ccactactca acgtccatat tattcacgta ataacgcggt
451 caagcgttca tatcccgcta aacgttttaa tgtgaaacgg tatcctgtat
501 cctctcgtaa ggcccatgaa gagcccaaga tggtgtccca acgtatccag
551 gagaatcaat atgggcctga gttcacaatg gcccataatt ccgctatctc
601 tacgtatatt agttatccag gtatgggcaa gactcttccc aaccgaagcc
651 ggtcatatat taagctgagg cgtttgcgtt ttaagggtac tgttaagatt
701 gagcgtgtaa cttctgacat gaacattgac ggctcggttc ccaaagttga
751 aggggtgttg tccattgtta tcgttgtcga tcgtaaacca cacttgagtg
801 catctggtcg cctgcataca tttgatgaac tcttcggtgc tctgatccac
851 agccatggaa ccctgtctat aactccgtct ttgaaagata ggttttacat
901 acgtcatgtg tgtaaacgtg tattgtccgt ggagaaggat tcaaccattg
951 tggaggttga aggatcaact agtctctcta ataggcgtta taacatgtgg
1001 tctatgttta gggatttaga acatgataca tgtaagggtg tttacgacaa
1051 tattagcaaa aacgccctat tagtgtatta ttgttggatg tcagatgtaa
1101 tgtctaaggc atcgcccttt gtatcatttg atctcgatta tttgggatag
1151 ttaatgaaaa taaattgtgt ttagcaatat tgaacaatct cattctgata
1201 aaacaaacat ttataattaa tttaatgttt tggttgtgat ggagtacaat
1251 tggtgttgat acattcctgg actgtcttcc taaccagctc gtttaattga
1301 gctacggaca tagttatatt ggactctgct ctttgggctc ccaccattga
1351 agcggactct cccgggtcca gtacgttacc ctctagcctg ttaagatgcc
1401 tgtatggatg taatgcgctc tccacttctg attgcgcatc tgaattacta
1451 acgcccagtg tgctccttga agcccatgtc tcaccgggcc ttatctgtat
1501 tgggcctcta agcccaactc ctgacatgga tgcgcatctg ataagctttc
1551 tctcccatct cccgtaatca acatgggaga agtctacatc cttgtctgag
1601 aattgcttgg ataggatctt aacagttggt ggtttgaacg gaatatccac
1651 agagtgtttc gccgtggaaa gtttgagctt ccctttgaac ttggcgaaat
1701 gcgttctctg ttgcacatta gtgtcgcaaa ctctgtaata gagcttccaa
1751 ggaatttcat ctttgaggga gaagaatgac gctgagaaat agtggagatc
1801 tatgttgcat ctaatgggaa aagtccattt agcctgtaag gattcgtttt
1851 gtgtcatcct catatcatgg atctccacaa tcacggtacc tgctgcattt
1901 attggtacct gctgcctgta ttctatgaca cagtggtcta tcttcataca
1951 actgcgactc agtctagcgc taaattgaga agcagcagaa ggaaattgta
2001 gtacaatctc agttaggtca tgcgaaagct gatattcctc acgatgagat
2051 tctatgtagt tgaacgcgtt tggtggatta gctaactgag aatccatata
2101 gtgatacctc ggccgcgcta gcggcacctc ttgaagaaga tatgcgcttg
2151 tgaagaagtg aaaggggtac tgatgaagat gataagaact tcagcactat
2201 gttttaatga tagaaaagtt actcaacaac tagtttgtag aattcttgct
2251 gctaatgaag ggaatatctg cgaaagaatg agatgatgtt gaaggcttag
2301 tgtttatatg gaagattatg acgatacttc tgataacgct ggaagactct
2351 tgaagaacta gggtttgtga aagagtaaag tgagtgttga gaagatgata
2401 atgcttcgga gatagatctt gtggtgtcta tttataattg gagttgattg
2451 tagtggcatt tttgtaaata agagtcagga caccaggctc tctccgctca
2501 ctagaactct atatgttggt gtcctggtgt cccttatata tgcaaggagt
2551 cccaggacac caggggcaaa agcggccatc cgtataatat t