Sequence of DPV Zucchini yellow mosaic virus

Zucchini yellow mosaic virus isolate ZYMV-Sa-3 coat protein gene, partial cds.

ACC No: JQ899265

Dated: 2012-06-25 | Length: 841 | CRC: 566660390

                
ID   JQ899265; SV 1; linear; genomic RNA; STD; VRL; 841 BP.
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AC   JQ899265;
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DT   25-JUN-2012 (Rel. 113, Created)
DT   25-JUN-2012 (Rel. 113, Last updated, Version 1)
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DE   Zucchini yellow mosaic virus isolate ZYMV-Sa-3 coat protein gene, partial
DE   cds.
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KW   .
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OS   Zucchini yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-841
RA   Al-Saleh M.A., Amer M.A.;
RT   "Characterization of different isolates of Zucchini yellow mosaic virus
RT   from three cucurbit species in Saudi Arabia";
RL   Unpublished.
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RN   [2]
RP   1-841
RA   Al-Saleh M.A., Amer M.A.;
RT   ;
RL   Submitted (04-APR-2012) to the INSDC.
RL   Plant Protection Department, King Saud University, King Saud University
RL   P.O. Box 2460 Riyadh 11451, Riyadh, Riyadh 11451, Saudi Arabia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .841
FT                   /organism="Zucchini yellow mosaic virus"
FT                   /host="Cucumis melo (muskmelon)"
FT                   /isolate="ZYMV-Sa-3"
FT                   /mol_type="genomic RNA"
FT                   /country="Saudi Arabia:Al-Kharj"
FT                   /isolation_source="leaves"
FT                   /collected_by="M. A. Al-Saleh and M. A. Amer"
FT                   /collection_date="20-Oct-2011"
FT                   /identified_by="M. A. Amer"
FT                   /PCR_primers="fwd_name: zyu, fwd_seq:
FT                   gctccatacatagctgagacagc, rev_name: zyd1186, rev_seq:
FT                   taggcttgcaaacggagtctaatc"
FT                   /db_xref="taxon:12232"
FT   CDS             <1. .841
FT                   /codon_start=2
FT                   /product="coat protein"
FT                   /protein_id="AFM56040.1"
FT                   /translation="SGTQPTVADAGATKKDKEDDKGKNKDVTGSGSGEKTVAAVTKDKD
FT                   VNAGSHGKIVPRLSKITKKMSLPRVKGNVILDIDHLLEYKPDQIELYNTRASHQQFASW
FT                   FNQVKTEYDLNEQQMGVVMNGFMVWCIENGTSPDINGVWVMMDGNEQVEYPLKPIVENA
FT                   KPTLRQIMHHFSDAAEAYIEMRNAEAPYMPRYGLLRNLRDRSLARYAFDFYEVNSKTPE
FT                   RAREAVAQMKAAALSNVSSSLFGLDGNVATTSEDTERHTARDVNRNMHTLLAVNTYH"
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SQ   Sequence 841 BP; 268 A; 164 C; 214 G; 195 T; 0 other;

jq899265 Length: 841  25-JUN-2012  Type: N  Check: 5894  ..

       1  atcaggcact cagccaactg tggcagacgc tggagccaca aagaaagaca
      51  aagaggatga taaagggaaa aacaaggatg ttacaggctc cggctcaggt
     101  gagaaaacag tggcagctgt cacgaaggac aaggatgtaa atgctggttc
     151  tcatgggaaa attgtgccgc gtctttcgaa gataacaaag aagatgtcgc
     201  tgccacgcgt gaaaggaaat gtaatactcg acattgatca cttgctggag
     251  tataagccgg atcaaattga gttatacaac acacgagcgt ctcatcagca
     301  attcgcctct tggttcaatc aagttaaaac agaatatgat ctgaatgagc
     351  aacagatggg agttgtaatg aatggtttca tggtttggtg cattgagaat
     401  ggtacgtcac ccgacattaa cggagtatgg gttatgatgg acggtaatga
     451  gcaggttgaa tatcctttga aaccaatagt tgaaaatgca aagccaacgc
     501  tgcgccaaat aatgcatcac ttttcagatg cagcggaggc atatatagag
     551  atgagaaatg cagaggcacc atacatgccg aggtatggtt tgcttcgaaa
     601  cttacgggat aggagtttgg cacgatatgc tttcgacttc tacgaagtca
     651  attctaaaac tccggaaaga gcccgcgaag ctgttgcgca gatgaaagca
     701  gcagccctta gcaatgtttc ttcaagcttg tttgggcttg atggaaatgt
     751  tgccaccact agcgaagaca ctgaacggca cactgcacgt gatgttaata
     801  ggaacatgca caccttgcta gctgtgaata cataccatta a