Sequence of DPV Soybean mosaic virus

Soybean mosaic virus strain AL3 P3 gene, partial cds.

ACC No: JQ915067

Dated: 2012-11-11 | Length: 1197 | CRC: 1466246874

                
ID   JQ915067; SV 1; linear; genomic RNA; STD; VRL; 1197 BP.
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AC   JQ915067;
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DT   11-NOV-2012 (Rel. 114, Created)
DT   11-NOV-2012 (Rel. 114, Last updated, Version 1)
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DE   Soybean mosaic virus strain AL3 P3 gene, partial cds.
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KW   .
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OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1197
RX   PUBMED; 22827506.
RA   Khatabi B., Fajolu O.L., Wen R.H., Hajimorad M.R.;
RT   "Evaluation of North American isolates of Soybean mosaic virus for gain of
RT   virulence on Rsv-genotype soybeans with special emphasis on
RT   resistance-breaking determinants on Rsv4";
RL   Mol. Plant Pathol. 13(9):1077-1088(2012).
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RN   [2]
RP   1-1197
RA   Khatabi B., Fajolu O.L., Wen R.H., Hajimorad M.R.;
RT   ;
RL   Submitted (09-APR-2012) to the INSDC.
RL   Entomology and Plant Pathology, The University of Tennessee, 2431 Joe
RL   Johnson Drive, 205 Ellington Plant Science Building, Knoxville, TN 37996,
RL   USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1197
FT                   /organism="Soybean mosaic virus"
FT                   /host="soybean V94-5152(Rsv4)"
FT                   /strain="AL3"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12222"
FT   CDS             <1. .>1197
FT                   /codon_start=1
FT                   /product="P3"
FT                   /protein_id="AFV77529.1"
FT                   /translation="GEVQQRMKCETALITSIFKPKRMIQILENDPYILLMGLVSPSILI
FT                   HMYRMKHFEKGVELWISKEHSVAKIFIILEQLTKRVAANDVLLEQLEMISETSERFMSI
FT                   LEDCPQAPHSYKTAKDLLTMYIERKASNHQLVENGFVDMNDKLYMAYEKIYSDRLKQEW
FT                   RALSWLEKFSITWQLKRFAPHTEKCLTKKVVEESSASSGNFASVCFMNAQSHLRNVRNT
FT                   LFQKCDQVWTASVRAFVRLIISTLHRCYSDIVYLVNICIIFSLLVQMTSVLQGIVNTAR
FT                   RDKALLSRWKRKEDEEAVIHLYEMCEKMEGGHPSIEKFLDHVKGVRPDLLPVAVSMTGQ
FT                   SEDVSAQAKTATQLQLEKIVAFMALLTMCIDNERSDAVFKVLSKLKAFFSTMGEDVKVQ
FT                   "
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SQ   Sequence 1197 BP; 404 A; 196 C; 276 G; 321 T; 0 other;

jq915067 Length: 1197  11-NOV-2012  Type: N  Check: 7  ..

       1  ggtgaagtgc aacagagaat gaagtgtgaa acagcactta taacaagcat
      51  tttcaaacct aagagaatga ttcaaatcct tgaaaatgac ccatacattc
     101  tcttgatggg cttggtttca ccttctatct tgattcacat gtatcgtatg
     151  aagcattttg agaaaggggt ggagttgtgg ataagtaaag aacatagtgt
     201  ggcaaagatt ttcatcatat tggaacaact cactaagagg gtcgctgcaa
     251  atgatgtgct acttgagcaa cttgaaatga tctcagaaac ttctgagagg
     301  ttcatgagta tcttagagga ttgccctcaa gcaccacatt catacaagac
     351  agcaaaagat ttgttgacaa tgtacataga aagaaaagca tccaaccacc
     401  aattggtgga gaatggtttt gtagacatga atgacaaatt gtacatggca
     451  tatgaaaaaa tctactcaga tcgcttgaag caggaatggc gcgcattaag
     501  ctggttggaa aaattttcta taacatggca attgaaaaga tttgctccac
     551  atacggagaa atgtttgaca aagaaagttg tagaagaaag cagcgcatct
     601  tcaggaaact ttgcgagtgt gtgcttcatg aatgcccagt cacacctaag
     651  aaatgtaaga aatacacttt tccaaaaatg tgaccaggtt tggactgcat
     701  cggtgcgagc ctttgtgagg ctcataattt caacacttca caggtgctac
     751  agtgatatag tttatctggt aaacatctgt ataatctttt cattacttgt
     801  ccaaatgact agtgtactgc agggcattgt caatacagca aggagagaca
     851  aagcactctt aagtagatgg aaaaggaaag aagatgaaga ggccgtgatt
     901  catttgtatg aaatgtgtga aaagatggaa ggtggacatc caagtattga
     951  aaaatttctg gaccatgtca agggagttag acctgattta ctccctgtgg
    1001  cagtaagcat gacaggacaa tcagaagatg tctccgcaca ggccaaaaca
    1051  gcaactcaat tgcaacttga gaaaattgtg gcattcatgg ctttgttgac
    1101  tatgtgtatt gataatgaaa ggagtgatgc ggttttcaaa gtattgagca
    1151  agttaaaggc atttttcagc acaatgggtg aggatgttaa agtgcag