Sequence of DPV Soybean mosaic virus

Soybean mosaic virus strain ArE5 P3 gene, partial cds.

ACC No: JQ915068

Dated: 2012-11-11 | Length: 1197 | CRC: 472168076

                
ID   JQ915068; SV 1; linear; genomic RNA; STD; VRL; 1197 BP.
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AC   JQ915068;
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DT   11-NOV-2012 (Rel. 114, Created)
DT   11-NOV-2012 (Rel. 114, Last updated, Version 1)
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DE   Soybean mosaic virus strain ArE5 P3 gene, partial cds.
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KW   .
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OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1197
RX   PUBMED; 22827506.
RA   Khatabi B., Fajolu O.L., Wen R.H., Hajimorad M.R.;
RT   "Evaluation of North American isolates of Soybean mosaic virus for gain of
RT   virulence on Rsv-genotype soybeans with special emphasis on
RT   resistance-breaking determinants on Rsv4";
RL   Mol. Plant Pathol. 13(9):1077-1088(2012).
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RN   [2]
RP   1-1197
RA   Khatabi B., Fajolu O.L., Wen R.H., Hajimorad M.R.;
RT   ;
RL   Submitted (09-APR-2012) to the INSDC.
RL   Entomology and Plant Pathology, The University of Tennessee, 2431 Joe
RL   Johnson Drive, 205 Ellington Plant Science Building, Knoxville, TN 37996,
RL   USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1197
FT                   /organism="Soybean mosaic virus"
FT                   /host="soybean V94-5152(Rsv4)"
FT                   /strain="ArE5"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12222"
FT   CDS             <1. .>1197
FT                   /codon_start=1
FT                   /product="P3"
FT                   /protein_id="AFV77530.1"
FT                   /translation="GEVQQRMKCETALITSIFKPKRMVQILENDPYILLMGLVSPSILI
FT                   HMYRMKHFEKGVELWISKEHSVAKIFIILEQLTKRVAANDVLLEQLEMISETSERFMSI
FT                   LEDCPQAPHSYKTAKDLLTMYIERKASNNQLVENGFVDMNDKLYMAYEKIYSDRLKQEW
FT                   RALSWLEKFSITWQLKRFAPHTEKCLTKKVVEESSASSGNFASVCFMNAQSHLRNVRNT
FT                   LFQKCDQVWTASVRAFVRFIISTLHKCYSDIVYLVNICIIFSLLVKMTSVLQGIVNTAR
FT                   RDKALLHSHKRREDEEAVIHLYEMCEKMEGGHPSIEGFLNHVRGVRPDLLSVAKNMTGQ
FT                   SEDVSAQVKTATQLQLEKIVAFMALLTMCIDNERSDAVFKVLSKLKAFFSTMGEDVKVQ
FT                   "
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SQ   Sequence 1197 BP; 404 A; 193 C; 278 G; 322 T; 0 other;

jq915068 Length: 1197  11-NOV-2012  Type: N  Check: 3528  ..

       1  ggtgaagtgc aacagagaat gaagtgtgaa acagcactga taacaagcat
      51  ttttaaacct aagagaatgg ttcaaatcct tgaaaatgac ccatacattc
     101  tcttgatggg cttggtttca ccttctatct tgattcacat gtatcgtatg
     151  aagcactttg agaaaggggt ggagttgtgg ataagtaaag aacatagtgt
     201  ggcaaagatt ttcatcatat tggaacaact cactaagagg gtcgctgcaa
     251  atgatgtgct acttgagcaa cttgaaatga tttcagaaac ttctgagagg
     301  ttcatgagta tcttagagga ttgccctcaa gcaccacatt catacaagac
     351  agcaaaagat ttgttgacaa tgtacataga aagaaaagca tccaataacc
     401  aattggtgga gaatggtttt gtagatatga atgataaatt gtatatggca
     451  tatgaaaaaa tttactcaga tcgcttgaag caggaatggc gcgcattaag
     501  ctggttggaa aaattttcta taacatggca attgaaaagg tttgctccac
     551  atacggagaa atgtttgaca aagaaagttg tagaagaaag cagcgcatct
     601  tcaggaaact ttgcgagtgt gtgcttcatg aatgcccagt cacacctaag
     651  aaatgtaaga aatacacttt ttcaaaaatg tgaccaggtt tggactgcat
     701  cggtgcgggc ctttgtaagg ttcataatct caacacttca caagtgctac
     751  agtgacatag tttatctggt aaacatctgt atcatcttct cattacttgt
     801  caaaatgact agtgtactgc aaggtattgt caatacagca aggagggaca
     851  aggcactcct acatagtcat aagagaagag aagatgaaga ggctgtgatt
     901  catttgtatg agatgtgtga aaagatggag ggcggacatc caagtattga
     951  aggatttttg aaccatgtca gaggagtaag acccgatctg ctttctgtag
    1001  caaagaacat gacaggacaa tcagaagatg tatctgcaca ggtcaagaca
    1051  gcaactcaat tgcaacttga gaaaattgtg gcattcatgg ctttgttaac
    1101  catgtgcatt gataatgaaa gaagtgatgc ggtcttcaaa gtactaagca
    1151  agctgaaggc atttttcagc acaatgggtg aggatgttaa agtgcag