Sequence of DPV Soybean mosaic virus

Soybean mosaic virus strain IL4 P3 gene, partial cds.

ACC No: JQ915069

Dated: 2012-11-11 | Length: 1197 | CRC: -1159013376

                
ID   JQ915069; SV 1; linear; genomic RNA; STD; VRL; 1197 BP.
XX
AC   JQ915069;
XX
DT   11-NOV-2012 (Rel. 114, Created)
DT   11-NOV-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Soybean mosaic virus strain IL4 P3 gene, partial cds.
XX
KW   .
XX
OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1197
RX   PUBMED; 22827506.
RA   Khatabi B., Fajolu O.L., Wen R.H., Hajimorad M.R.;
RT   "Evaluation of North American isolates of Soybean mosaic virus for gain of
RT   virulence on Rsv-genotype soybeans with special emphasis on
RT   resistance-breaking determinants on Rsv4";
RL   Mol. Plant Pathol. 13(9):1077-1088(2012).
XX
RN   [2]
RP   1-1197
RA   Khatabi B., Fajolu O.L., Wen R.H., Hajimorad M.R.;
RT   ;
RL   Submitted (09-APR-2012) to the INSDC.
RL   Entomology and Plant Pathology, The University of Tennessee, 2431 Joe
RL   Johnson Drive, 205 Ellington Plant Science Building, Knoxville, TN 37996,
RL   USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1197
FT                   /organism="Soybean mosaic virus"
FT                   /host="soybean V94-5152(Rsv4)"
FT                   /strain="IL4"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12222"
FT   CDS             <1. .>1197
FT                   /codon_start=1
FT                   /product="P3"
FT                   /protein_id="AFV77531.1"
FT                   /translation="GEVQQRMKCETALITSIFKPKRMVQILENDPYILLMGLVSPSILI
FT                   HMYRMKHFEKGVELWISKEHSVAKIFIILEQLTKRVAANDVLLEQLEMISETSERFMSI
FT                   LEDCPQVPQSYKTAKDLLTMYIERKASNSQLVENGFVDMNDKLYMAYEKIYSDRLKQEW
FT                   RALSWLEKFSITWQLKRFAPHTEKCLTKKVVEESSASSGNFASVCFMNAQSHLRNVRNT
FT                   LFQKCDQVWTASVRAFVRFIISTLHRCYSDIVYLVNICIIFSLLVQMTSVLQGIVNTAR
FT                   RDKALLNRWKRKEDEEAVIHLYEMCEKMEGGHPSIEKFLDHVKGVRPDLLPIAVSMTGQ
FT                   SEDVSAQAKTATQLQLEKIVAFMALLTMCIDNERSDAVFKVLSKLKTFFSTMGEDVKVQ
FT                   "
XX
SQ   Sequence 1197 BP; 400 A; 194 C; 286 G; 316 T; 1 other;

jq915069 Length: 1197  11-NOV-2012  Type: N  Check: 837  ..

       1  ggtgaagtgc aacaaaggat gaagtgtgaa acagcactca taacaagcat
      51  tttcaaacct aagagaatgg ttcaaatcct tgagaatgac ccatacattc
     101  ttttgatggg cttggtttca ccttccattc tgattcacat gtatcgtatg
     151  aagcattttg agaaaggggt ggagttgtgg ataagtaaag aacatagtgt
     201  ggcaaagatt ttcatcatat tggaacaact cactaagagg gtcgctgcaa
     251  atgacgtgtt gcttgagcaa cttgagatga tatcagaaac ttctgagaga
     301  ttcatgagca ttctagagga ctgtcctcaa gtgccacagt catacaagac
     351  ggcaaaagat ttgttgacaa tgtacataga gagaaaagca tctaacagcc
     401  aactggtgga gaatggtttt gtagatatga atgataaact gtatatggca
     451  tatgaaaaaa tctattcaga tcgcttgaag caggaatggc gcgcattaag
     501  ctggttggaa aaattttcta taacatggca attgaaaaga tttgctccac
     551  atacggagaa atgtttgaca aagaaagttg tagaagaaag cagcgcatct
     601  tcaggaaact ttgcgagtgt gtgcttcatg aatgcccagt cacacctaag
     651  aaatgtaaga aatacacttt ttcaaaaatg tgaccaggtt tggactgcat
     701  cggtgcgagc ctttgtgagg ttcataattt caacacttca caggtgctat
     751  agtgatatag tttatctggt gaacatctgc ataatattct cattgcttgt
     801  ccaaatgact agtgtgctgc agggcattgt caacacagca aggagagaca
     851  aagcactctt gaatagatgg aaaaggaaag aagatgaaga ggccgtgatt
     901  catttgtatg aaatgtgtga aaagatggaa ggtggacatc caagtattga
     951  gaaatttttg gaccatgtca agggggttag acccgatcta ctccccatag
    1001  cagtgagcat gacaggacaa tcagaagatg tctccgcaca ggccaaaaca
    1051  gcaactcaat tgcaaytaga gaaaattgtg gcatttatgg ctttgttgac
    1101  catgtgtata gataatgaaa ggagtgatgc ggtcttcaaa gtattgagca
    1151  aattaaagac attcttcagc acaatgggtg aggatgttaa agtgcag