Sequence of DPV Soybean mosaic virus

Soybean mosaic virus strain TN2 P3 gene, partial cds.

ACC No: JQ915070

Dated: 2012-11-11 | Length: 1197 | CRC: 900367849

                
ID   JQ915070; SV 1; linear; genomic RNA; STD; VRL; 1197 BP.
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AC   JQ915070;
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DT   11-NOV-2012 (Rel. 114, Created)
DT   11-NOV-2012 (Rel. 114, Last updated, Version 1)
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DE   Soybean mosaic virus strain TN2 P3 gene, partial cds.
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KW   .
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OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1197
RX   PUBMED; 22827506.
RA   Khatabi B., Fajolu O.L., Wen R.H., Hajimorad M.R.;
RT   "Evaluation of North American isolates of Soybean mosaic virus for gain of
RT   virulence on Rsv-genotype soybeans with special emphasis on
RT   resistance-breaking determinants on Rsv4";
RL   Mol. Plant Pathol. 13(9):1077-1088(2012).
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RN   [2]
RP   1-1197
RA   Khatabi B., Fajolu O.L., Wen R.H., Hajimorad M.R.;
RT   ;
RL   Submitted (09-APR-2012) to the INSDC.
RL   Entomology and Plant Pathology, The University of Tennessee, 2431 Joe
RL   Johnson Drive, 205 Ellington Plant Science Building, Knoxville, TN 37996,
RL   USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1197
FT                   /organism="Soybean mosaic virus"
FT                   /host="soybean V94-5152(Rsv4)"
FT                   /strain="TN2"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12222"
FT   CDS             <1. .>1197
FT                   /codon_start=1
FT                   /product="P3"
FT                   /protein_id="AFV77532.1"
FT                   /translation="GEVQQRMKCETALITSIFKPKRMVQILENDPYILLMGLVSPSILI
FT                   HMYRMKHFEKGVELWISKEHSVAKIFIILEQLTKRVAANDVLLEQLEMISETSERFMSI
FT                   LEDCPQAPQSYKTARDLLAMYIERKASNSQLVENGYVDMNDKLYMAYEKIYSDRLKQEW
FT                   RALSWLEKFSTTWQLKRFAPHTEKCLTKKVVEESSASSGNFASVCFMNAQSHLRNVRNT
FT                   LFQKCDQVWTASVRTFVRFIISTLHRCYSDIVYLVNICIIFSLLVQMTSVLQGIVNTAR
FT                   RDKALLNRWKRKEDEEAVIHLYEMCEKMEGGHPSIEKFLDHVKGVRPDLLPIAVSMTGQ
FT                   SEDVSAQAKTATQLQLEKIVAFMALLTMCIDNERSDAVFKVLSKLKTFFSTMGEDVKVQ
FT                   "
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SQ   Sequence 1197 BP; 402 A; 192 C; 279 G; 324 T; 0 other;

jq915070 Length: 1197  11-NOV-2012  Type: N  Check: 4255  ..

       1  ggtgaggtac aacaaaggat gaagtgtgaa acagcactca taacaagcat
      51  tttcaaaccc aagagaatgg ttcaaatcct tgagaatgat ccatacattc
     101  ttttaatggg cttggtttca ccttctattc tgattcatat gtatcgtatg
     151  aagcattttg agaaaggggt ggagttgtgg ataagtaaag aacatagtgt
     201  ggcaaagatc ttcatcatat tggaacaact cactaagagg gtcgctgcaa
     251  atgatgtgtt acttgagcaa cttgaaatga tttcagaaac ttctgagaga
     301  ttcatgagca ttctagagga ctgccctcaa gcgccacagt catacaagac
     351  agcaagagat ttgttggcaa tgtacataga aaggaaagca tctaatagcc
     401  aattggtgga gaatggttat gtagatatga atgacaaatt gtacatggca
     451  tatgaaaaaa tctattcaga tcgcttgaag caggaatggc gcgcattaag
     501  ctggttggaa aaattttcta caacttggca attgaaaaga tttgctccac
     551  atacggagaa atgtttgaca aagaaagttg tagaagaaag cagcgcatct
     601  tcaggaaact ttgcgagtgt gtgcttcatg aatgcccagt cacacctaag
     651  aaatgtaaga aatacacttt ttcaaaaatg tgaccaggtt tggactgcat
     701  cggtgcgaac ctttgtgagg ttcatcattt caacacttca cagatgctac
     751  agtgatatag tttatttggt gaatatctgt ataatctttt cattgcttgt
     801  ccaaatgact agtgtgctgc agggcattgt caacacagca aggagagaca
     851  aagcactctt aaatagatgg aaaaggaaag aagatgaaga ggccgtgatt
     901  catttgtatg aaatgtgtga aaagatggaa ggtggacatc caagtattga
     951  gaaattcttg gatcatgtca agggagttag acccgatcta ctccctatag
    1001  cagtgagcat gacaggacaa tcagaagatg tctccgcaca ggccaaaaca
    1051  gcaactcaat tgcaacttga gaaaattgtg gcattcatgg ctttgttaac
    1101  catgtgtatt gataatgaaa ggagtgatgc ggttttcaaa gtattgagta
    1151  agttaaagac atttttcagc acaatgggtg aagatgtcaa agtgcag