Sequence of DPV Soybean vein necrosis virus

Soybean vein necrosis virus isolate Delaware 3 nucleoprotein gene, complete cds.

ACC No: JQ946874

Dated: 2013-04-10 | Length: 834 | CRC: 929699912

                
ID   JQ946874; SV 1; linear; genomic RNA; STD; VRL; 834 BP.
XX
AC   JQ946874;
XX
DT   10-OCT-2012 (Rel. 114, Created)
DT   10-APR-2013 (Rel. 116, Last updated, Version 2)
XX
DE   Soybean vein necrosis virus isolate Delaware 3 nucleoprotein gene, complete
DE   cds.
XX
KW   .
XX
OS   Soybean vein necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN   [1]
RC   Publication Status: Available-Online prior to print
RP   1-834
RX   PUBMED; 23550970.
RA   Zhou J., Tzanetakis I.;
RT   "Epidemiology of Soybean vein necrosis associated virus";
RL   Phytopathology 0:0-0(2013).
XX
RN   [2]
RP   1-834
RA   Zhou J., Tzanetakis I.E.;
RT   ;
RL   Submitted (17-APR-2012) to the INSDC.
RL   Dept. of Plant Pathology, University of Arkansas, 495 N. Campus Drive, PTSC
RL   217, Fayetteville, AR 72701, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .834
FT                   /organism="Soybean vein necrosis virus"
FT                   /host="soybean"
FT                   /isolate="Delaware 3"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="15-Sep-2011"
FT                   /db_xref="taxon:980895"
FT   CDS             1. .834
FT                   /codon_start=1
FT                   /product="nucleoprotein"
FT                   /db_xref="GOA:F2Y3K4"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:F2Y3K4"
FT                   /protein_id="AFU62964.1"
FT                   /translation="MPQTAGPSNAKPVKLTESNLARLLKFEEDIEFEKNSTGFKFSEFY
FT                   KTHMGRKFRYASALTFLKNRKAIVNMCKKGTFNFDGQTVKLSVESGDDNSFTFKRLDSF
FT                   LRVKMLEHNFAVFDGTNEEAKQSLCNDLATIPLVQAYGLTVKDKMSAKLAIMIGGSLPL
FT                   LASITGCEAYCFGLAIFQDLKKEQLGIVNFDTKAQAAKVASVLDAKGFKFTEEKNQTLR
FT                   LIAEILKDMAPQMRGVASLEKYNEQIGIISDIIGVHFEMPGKKDGKGKKSKEFSV"
XX
SQ   Sequence 834 BP; 286 A; 149 C; 183 G; 216 T; 0 other;

jq946874 Length: 834  10-APR-2013  Type: N  Check: 8621  ..

       1  atgccacaaa cagcaggacc aagcaatgca aaaccagtga agctcactga
      51  gtcaaaccta gcaagacttc tcaaatttga agaagacata gaatttgaga
     101  aaaacagcac aggattcaag ttcagcgaat tctacaaaac ccacatgggt
     151  cgcaaattca ggtatgcatc tgcattgacc tttctcaaaa acagaaaggc
     201  tattgtcaac atgtgcaaaa aagggacatt taattttgac ggacaaactg
     251  ttaaattgtc tgtagagagt ggtgatgaca atagcttcac ttttaaaaga
     301  ctggatagct ttctgagagt gaagatgctt gaacacaatt ttgcagtttt
     351  tgatggaaca aatgaagagg ctaaacaaag cttgtgcaat gatttagcaa
     401  ccatcccact tgtgcaagct tatggtctga ctgtgaaaga taagatgtca
     451  gcaaagcttg ctataatgat tggtggaagc ttaccccttc tggcatcaat
     501  cacaggttgt gaagcctatt gttttggttt agctatcttc caggacctaa
     551  agaaagaaca gcttggtatt gtcaactttg acacaaaggc tcaagctgct
     601  aaagttgcat ctgtgctgga tgcaaagggc tttaaattca ctgaagagaa
     651  aaatcaaact ctcaggctga ttgctgagat actgaaggac atggcacccc
     701  aaatgagagg agttgcatcc cttgagaagt acaatgaaca gattggaatc
     751  atttctgata tcattggggt ccattttgaa atgcctggaa agaaagatgg
     801  aaaaggcaag aaatcaaagg agttttctgt ttaa