Sequence of DPV Potato virus Y

Potato virus Y strain PB_702*1957 isolate 702 capsid protein gene, partial cds.

ACC No: JQ954327

Dated: 2012-08-05 | Length: 801 | CRC: 822189362

                
ID   JQ954327; SV 1; linear; genomic RNA; STD; VRL; 801 BP.
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AC   JQ954327;
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DT   05-AUG-2012 (Rel. 113, Created)
DT   05-AUG-2012 (Rel. 113, Last updated, Version 1)
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DE   Potato virus Y strain PB_702*1957 isolate 702 capsid protein gene, partial
DE   cds.
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KW   .
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OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RC   Publication Status: Available-Online prior to print
RP   1-801
RX   PUBMED; 22837421.
RA   Cuevas J., Delaunay A., Rupar M., Jacquot E., Elena S.F.;
RT   "Molecular evolution and phylogeography of Potato virus Y based on the CP
RT   gene";
RL   J. Gen. Virol. 0:0-0(2012).
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RN   [2]
RP   1-801
RA   Delaunay A., Jacquot E.;
RT   ;
RL   Submitted (19-APR-2012) to the INSDC.
RL   UMR INRA-CIRAD-Montpellier SupAgro BGPI, INRA, Cirad TA A-54K, Campus
RL   international de Baillarguet, Montpellier cedex 5 34398, France
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FH   Key             Location/Qualifiers
FH
FT   source          1. .801
FT                   /organism="Potato virus Y"
FT                   /host="Solanum tuberosum"
FT                   /strain="PB_702*1957"
FT                   /isolate="702"
FT                   /mol_type="genomic RNA"
FT                   /country="Netherlands"
FT                   /collected_by="Rene Van der Vlugt"
FT                   /collection_date="1957"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .>801
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /note="coat protein"
FT                   /protein_id="AFO84352.1"
FT                   /translation="ANDTIDAGGSNKREAKPEQSSIQSNPNKGKDKDVNAGTSGTHTVP
FT                   RIKAITSKMRMPKSKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVRMAYDIG
FT                   ETEMPTVMNGLMVWCIENGTSPNVNGVWVMMDGNEQVEYPLKPIVENAKPTLRQIMAHF
FT                   SDVAEAYIEMRNKKEPYMPRYGLIRNLRDVGLARYAFDFYEVTSRTPVRAREAHIQMKA
FT                   AALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
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SQ   Sequence 801 BP; 269 A; 161 C; 201 G; 170 T; 0 other;

jq954327 Length: 801  05-AUG-2012  Type: N  Check: 3256  ..

       1  gcaaatgaca caattgatgc aggaggaagc aacaagagag aggcaaaacc
      51  agagcaaagc agcattcagt caaacccgaa caaaggaaaa gataaggatg
     101  ttaatgctgg cacatctggg acacatactg tgccgagaat caaggctatc
     151  acgtccaaaa tgagaatgcc caaaagcaag ggagcaaccg tgctaaactt
     201  agaacatttg cttgagtatg ctccacaaca aattgatatt tcaaatactc
     251  gggcaactca atcacagttt gatacgtggt atgaggcagt gcggatggca
     301  tacgacatag gagaaactga gatgccaact gtgatgaatg ggcttatggt
     351  ttggtgcatt gaaaatggaa cctcgccaaa tgtcaacgga gtttgggtta
     401  tgatggatgg gaatgaacaa gttgagtacc cgttgaaacc aatcgttgag
     451  aatgcaaaac caacccttag gcaaatcatg gcacatttct cagatgttgc
     501  agaagcgtat atagaaatgc gcaacaaaaa ggaaccatat atgccacgat
     551  atggtttaat tcgaaatctg cgggatgtgg gtttagcgcg ttatgccttt
     601  gacttttatg aggtcacatc acgaacacca gtgagggcta gggaagcgca
     651  cattcaaatg aaggccgcag cattgaaatc agcccaacct cgacttttcg
     701  ggttggacgg tggcatcagt acacaagagg agaacacaga gaggcacacc
     751  accgaggatg tctctccaag tatgcatact ctacttggag tcaagaacat
     801  g