Sequence of DPV Bhanja virus
Bhanja virus strain M3811 segment M, complete sequence.
ACC No: JQ956377
Dated: 2012-07-31 | Length: 3304 | CRC: -1362267478
ID JQ956377; SV 1; linear; viral cRNA; STD; VRL; 3304 BP.
XX
AC JQ956377;
XX
DT 31-JUL-2012 (Rel. 113, Created)
DT 31-JUL-2012 (Rel. 113, Last updated, Version 1)
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DE Bhanja virus strain M3811 segment M, complete sequence.
XX
KW .
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OS Bhanja virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus;
OC unclassified Phlebovirus.
XX
RN [1]
RC Publication Status: Available-Online prior to print
RP 1-3304
RX PUBMED; 22806684.
RA Dilcher M., Alves M.J., Finkeisen D., Hufert F., Weidmann M.;
RT "Genetic characterization of Bhanja virus and Palma virus, two tick-borne
RT phleboviruses";
RL Virus Genes 0:0-0(2012).
XX
RN [2]
RP 1-3304
RA Dilcher M., Alves M.J., Finkeisen D., Hufert F.T., Weidmann M.;
RT ;
RL Submitted (18-APR-2012) to the INSDC.
RL Department of Virology, University Medical Center Goettingen, Kreuzbergring
RL 57, Goettingen, Lower Saxony D-37075, Germany
XX
FH Key Location/Qualifiers
FH
FT source 1. .3304
FT /organism="Bhanja virus"
FT /segment="M"
FT /strain="M3811"
FT /mol_type="viral cRNA"
FT /note="passaged in Vero-E6 cells"
FT /db_xref="taxon:1213620"
FT CDS 24. .3233
FT /codon_start=1
FT /product="glycoprotein precursor"
FT /note="contains glycoproteins Gn and Gc"
FT /protein_id="AFO66273.1"
FT /translation="MMFTHALMLALICAVTCDDNPCLWERFANSRDMEFMTPVVNLSTS
FT RGLSISQRICMVSMGEHWSRILSEAEEKEMKNLDPLVMSSLNWRGTAKTRSSTSFNFDI
FT LDAIFLGLLNMTKWDEDSSRQKPIHPECIKSKVCGFMTASGPRVKTCSGKFRGADRHGH
FT CTNRATPYEATNVISVGVQHAQEADLLDEQEANFISEARKSNNPDLCSVDGVEINQCDM
FT TSPGRWLLLHYASFRLQEGSLVYFSPGLNIKWSQINAPISDFFCINVSKHLDSHYRPCD
FT INCTNECQGDELYCSIHQCARSAECKCSFIGSRGVAQVQIGDRWFTPAVVGSQQFFVKE
FT EVPILQQPSTDCTTCAMTCSTEGISISSIKDELKDVTVCVEGFCSTRMSKGSKVWKIEF
FT HNQYPSSGSIALARGTTVGGESFELTAECGRRSGCEQINCLFCKEMLSNPQCYPYGKWL
FT LLFLILAIFYIFIALLRTIMRIVMTCLSILYGPFMIVIKISKCLGRLGKKKGERTYVRL
FT MEAIDEEKKPDVQRPTTPVGRTKQPRIVLFIVLALLMHVALCCDESRLIEETSVTCTPG
FT SDNVFSCSTKEIITVKELRAGKTICVSLKGPGGSLSNPIKIKMLDIVGRSDLLDVYFTF
FT NGHANCKSVRRCRWAGSCGNSGCVGVGKEDYDRELGEQESSAHPNWRDCYDGCGGAACG
FT CFNAAPSCIFLKRYVTNADSRVFKVFKPSAWFLSTKIVVDTASHKEDITLKSGEARVID
FT KVSFHYRTDRNLFAGITIPPIVTEVKRDGKPLSFFLENQGQHPKCKDENSARVSSASNC
FT IIDQNSISANARVDDVSCRSNLVSVSGMSALKPLPQRVGDFLIELQNDEPVLLATGDSG
FT VVEGELQIDLSHKKISIKVDTTVCRGSMKELKGCVGCTKGAFVSLEVHSTSAGSASLQC
FT SLSSCYMEVQKGINNVNCSLRFAKAVVEEACVLACSGSKEQLMIKGNLIIGGDFKKLTE
FT DSATSFSHGDSKDTRIHLQTGFLNWLDTLFGTSLIGKVLGIGFAILSPFILILILKWIV
FT KAIIRRSRIRQSSRHDVIKDN"
XX
SQ Sequence 3304 BP; 952 A; 684 C; 811 G; 857 T; 0 other;
jq956377 Length: 3304 31-JUL-2012 Type: N Check: 9780 ..
1 acacaaagac gccagttatc aagatgatgt tcacacatgc actgatgctg
51 gcactgattt gtgctgtaac ttgcgatgat aacccatgcc tctgggagag
101 gtttgccaat tccagggata tggagtttat gactcctgtt gtcaacctga
151 gcacctctag gggtctgtca atatcccaga ggatttgcat ggttagtatg
201 ggagaacact ggtctagaat cctgagtgag gcagaggaaa aggagatgaa
251 aaatcttgac cccttggtga tgtcaagcct gaactggagg ggtacagcta
301 aaaccaggag ttcgacatct ttcaactttg acatcctgga tgccattttc
351 ttgggcctcc ttaacatgac caaatgggat gaggacagca gtaggcaaaa
401 acccatccac cccgagtgca tcaaatccaa agtttgcggc ttcatgacag
451 cctcaggacc tagggtcaag acctgttctg gcaagttcag aggagcagac
501 aggcatggcc attgcaccaa cagagccaca ccctatgagg cgacaaatgt
551 gatctctgtc ggtgtgcaac atgctcaaga ggctgacttg ttggatgagc
601 aagaagcaaa cttcatatct gaggcgagaa aatcaaacaa tcctgactta
651 tgcagtgttg acggggtaga gatcaatcaa tgtgacatga cctccccagg
701 cagatggctc ctcctacatt acgctagctt cagactgcaa gaaggaagtc
751 tagtgtactt ctctcccggc ctcaacataa aatggagcca aatcaatgcg
801 ccaatctctg acttcttctg catcaatgtg tccaagcacc tggattctca
851 ctacagacct tgtgatataa attgcaccaa tgaatgtcag ggggatgaac
901 tctactgctc aatccatcaa tgtgccagat cagctgaatg caaatgctcg
951 tttataggga gtagaggtgt ggctcaagtc cagataggag atcgatggtt
1001 tacgcctgcg gttgtaggaa gccagcaatt ttttgttaaa gaggaggtcc
1051 ctatccttca gcagccatcc acagactgca ccacatgtgc catgacatgc
1101 tcaaccgaag gaatttctat tagtagcatt aaggatgagc tcaaagatgt
1151 gacagtatgt gttgaaggat tctgctccac aaggatgagt aaggggtcta
1201 aggtgtggaa aattgagttt cataaccagt acccatcctc tggatcaatt
1251 gctctggcca gaggtacaac tgtgggaggt gaaagttttg aactcactgc
1301 tgaatgtggg aggaggtcag gctgtgagca gatcaactgc ctcttctgca
1351 aggaaatgtt atcaaacccg caatgctacc cctatggcaa gtggcttctt
1401 cttttcttga tacttgccat tttctacatc ttcattgccc ttctcaggac
1451 tatcatgagg atagtcatga cttgcctctc aatcctttat ggacctttca
1501 tgattgtcat caagatctca aaatgcttgg gcagattggg gaagaagaaa
1551 ggtgagagga cttatgtcag actgatggag gctatagatg aggagaagaa
1601 acctgatgtg caaagaccaa caacaccggt gggaagaacc aaacagcctc
1651 gcattgtatt attcattgtt ttagccttac tgatgcatgt ggctctctgc
1701 tgtgatgaga gtcgattgat agaagaaaca tctgtgacct gcacccctgg
1751 ctctgataat gtcttctctt gttctactaa ggaaataatc actgttaaag
1801 agttaagggc agggaaaaca atctgtgtca gcttgaaagg gcccggaggt
1851 agtctttcaa accccattaa aatcaaaatg cttgatatag tggggagatc
1901 agatcttctg gatgtctatt tcacttttaa tggccacgcc aattgtaaat
1951 ctgtccgtag gtgcagatgg gcaggatcat gtggcaattc aggatgtgtg
2001 ggtgttggga aggaagatta tgacagggag ttgggagaac aagagtcctc
2051 agcacatcca aactggagag actgctatga tggctgtgga ggtgcagcat
2101 gtggatgttt taatgcagct cctagttgca ttttccttaa gagatatgtc
2151 accaatgctg actcacgagt ctttaaagtg ttcaaacctt ccgcatggtt
2201 tttgtccacc aagatagtgg ttgacactgc atcacataag gaggacataa
2251 cattaaaaag tggggaagcc agagtcattg ataaggtgtc attccattac
2301 agaactgaca gaaacctgtt tgcaggcatc acaatccctc ccatagtgac
2351 agaggtgaag agagatggga agcccctcag tttctttttg gaaaaccaag
2401 gacagcaccc aaaatgcaaa gatgaaaatt cagcaagagt ttcatcagca
2451 tcaaactgca ttatagacca aaactcaatc tcagccaatg caagagtaga
2501 tgatgtgtct tgtaggagca acctagtcag tgtttcaggg atgagtgctc
2551 tcaagccctt gccacagagg gtgggagact tcctcataga actgcagaat
2601 gatgagccag ttcttttggc aacaggggat tcaggggttg ttgaaggaga
2651 actccagata gatctgtcac ataagaaaat atctatcaag gttgacacca
2701 cagtttgtag aggctctatg aaagagctca aagggtgcgt gggctgcacc
2751 aaaggggcct ttgtctcact agaagttcac tcaacttcag caggatcagc
2801 cagtcttcag tgtagtctaa gtagctgcta catggaagtt cagaaaggaa
2851 taaacaatgt taattgttcc ctcagatttg ccaaggcagt tgttgaggaa
2901 gcttgtgtac tagcttgctc agggtccaag gaacagttga tgattaaggg
2951 gaatctcata attggaggag attttaagaa actgacagag gactcagcaa
3001 caagtttttc tcatggtgat tccaaagaca caagaatcca tctgcagact
3051 ggatttttga actggctaga cacattattt ggcaccagtc tcattggaaa
3101 agtgctggga ataggctttg caattctatc tccattcatt ttaatcctga
3151 tcttaaagtg gattgtgaaa gctataatca gaagatccag gattaggcag
3201 agctcaagac acgatgtgat caaggacaac taagtcatct gacctgatgg
3251 atttccatct ctagtcttcg ggctagagag ttccaatgct ggcggtcttt
3301 gtgt