Sequence of DPV Plum pox virus

Plum pox virus isolate P1 polyprotein gene, partial cds.

ACC No: JQ970439

Dated: 2012-07-25 | Length: 1114 | CRC: -160154653

                
ID   JQ970439; SV 1; linear; genomic RNA; STD; VRL; 1114 BP.
XX
AC   JQ970439;
XX
DT   25-JUL-2012 (Rel. 113, Created)
DT   25-JUL-2012 (Rel. 113, Last updated, Version 1)
XX
DE   Plum pox virus isolate P1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Plum pox virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1114
RA   Sheveleva A.A., Chirkov S.N.;
RT   "Plum pox virus strain Winona";
RL   Unpublished.
XX
RN   [2]
RP   1-1114
RA   Sheveleva A.A., Chirkov S.N.;
RT   ;
RL   Submitted (23-APR-2012) to the INSDC.
RL   Virology, Lomonosov Moscow State University, Leninskie Gory 1-12, Moscow
RL   119991, Russia
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1114
FT                   /organism="Plum pox virus"
FT                   /host="Prunus domestica"
FT                   /strain="Winona"
FT                   /isolate="P1"
FT                   /mol_type="genomic RNA"
FT                   /country="Russia"
FT                   /collected_by="Prichodko Yuri"
FT                   /collection_date="Jun-2010"
FT                   /db_xref="taxon:12211"
FT   CDS             <1. .1071
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains replicase and coat protein; NIb-CP-3' NCR"
FT                   /protein_id="AFN84605.1"
FT                   /translation="TEIERYLEAFYSGSGEEYDSNIVMHQANEEDDDSTVDAGRPALPA
FT                   TTPPTTATAPQAPATSTQPLQSTTSMFNPIFTPATTQPSTKPSTSATTNPTSFGVVGNE
FT                   SVAPSSSNALANLGRDRDVDAGSIGTFTVPRLKAMTSKLSLPKVRGKAIMNLNHLAHYN
FT                   PAQVDLSNTRAPQSCFQTWYEGVKRDYEVTDDEMSIILNGLMVWCIENGTSPNINGMWV
FT                   MMDGETQVEYPIKPLLDHAKPTFRQIMAHFSNVAEAYIEKRNYEKAYMPRYGIQRNLTD
FT                   YSLARYAFDFYEMTSTTPIRAREAHIQMKAAALRNVQNRLFGLDGNVGTQEEDTERHTA
FT                   GDVNRNMHNLLGVRGV"
XX
SQ   Sequence 1114 BP; 346 A; 251 C; 266 G; 251 T; 0 other;

jq970439 Length: 1114  25-JUL-2012  Type: N  Check: 4470  ..

       1  acggagattg agagatatct cgaagccttt tacagtggct ctggggaaga
      51  gtacgactcc aacatagtga tgcaccaggc aaacgaggaa gatgacgatt
     101  caactgtaga tgcaggcagg cctgctcttc cagcgacaac acctccaacc
     151  accgcaacgg cgccacaggc accagccaca tcaactcaac ctctgcagag
     201  cacaacgtca atgttcaacc ctatttttac gccagcaaca acgcaaccga
     251  gcacaaagcc atccacatca gcaacaacta acccgacatc ttttggcgtg
     301  gtaggaaatg agagtgtggc accttcttct tctaatgcac tggctaacct
     351  agggagagat agagacgttg acgcgggttc tatcggaacc ttcacagtac
     401  cacggttgaa agccatgact tcgaagctat cacttccaaa agttagggga
     451  aaagccatca tgaaccttaa ccatttggct cattacaatc ctgcacaggt
     501  tgatctatca aacacgcggg ctccacagtc atgtttccaa acttggtatg
     551  agggagtgaa gcgtgattat gaggtcacag atgatgaaat gagcattatt
     601  ttgaacggtc ttatggtatg gtgcattgaa aatgggacct ctccaaacat
     651  taatgggatg tgggtcatga tggacggaga aacacaagtg gaatatccaa
     701  taaagccatt gttggatcat gcgaaaccca cttttagaca gattatggca
     751  catttcagta acgttgctga agcgtatatt gaaaagcgaa actatgagaa
     801  agcatacatg ccaaggtatg gaattcagcg aaacctgaca gactacagcc
     851  tcgccagata tgcctttgat ttctatgaga tgacctcaac aacacctata
     901  agggcacgtg aggcacatat tcaaatgaag gcagcagcat tgagaaatgt
     951  tcagaatcgt ttatttggct tggatggaaa tgtcggaaca caagaagagg
    1001  acacagagag acacaccgct ggtgatgtta atcgcaacat gcataacctc
    1051  ctcggggtga ggggagtgta gtggtctcgg tatctatcat aaacgtaact
    1101  tgggtgagag tcta