Sequence of DPV Cowpea mild mottle virus

Cowpea mild mottle virus strain CY coat protein (CP) gene, partial cds.

ACC No: JX020701

Dated: 2012-05-29 | Length: 864 | CRC: -368417997

                
ID   JX020701; SV 1; linear; genomic RNA; STD; VRL; 864 BP.
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AC   JX020701;
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DT   29-MAY-2012 (Rel. 112, Created)
DT   29-MAY-2012 (Rel. 112, Last updated, Version 1)
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DE   Cowpea mild mottle virus strain CY coat protein (CP) gene, partial cds.
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KW   .
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OS   Cowpea mild mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Betaflexiviridae; Carlavirus.
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RN   [1]
RP   1-864
RA   Chang C.-A., Tsai C.-F., Cheng Y.-H.;
RT   "Identification of a carlavirus causing severe foliar rugosity and dwarf
RT   symptom on vine type of French bean";
RL   Zhi Wu Bing Li Xue Hui Kan 19:99-100(2010).
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RN   [2]
RP   1-864
RA   Chang C.-A., Tsai C.-F., Cheng Y.-H.;
RT   ;
RL   Submitted (04-MAY-2012) to the INSDC.
RL   Graduate Institute of Biological Sciences, Chaoyang University of
RL   Technology, 168, Jifong East Rd., Taichung 41349, Taiwan, Republic of China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .864
FT                   /organism="Cowpea mild mottle virus"
FT                   /host="Phaseolus vulgaris"
FT                   /strain="CY"
FT                   /isolate="CpMMV-P"
FT                   /mol_type="genomic RNA"
FT                   /country="Taiwan:Nantou County"
FT                   /collection_date="Mar-2009"
FT                   /db_xref="taxon:67761"
FT   gene            1. .>864
FT                   /gene="CP"
FT   CDS             1. .>864
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="AFK33288.1"
FT                   /translation="MESVFDLNKLVDSEMAEKAKTGVPKAADGTALPDIDAELQKRLDD
FT                   LRAFLRKTQSASEITNPGFELGRPALKESTFNSDKHTHIYGKWSIDQLSRIVPKKISNN
FT                   MATAEEMAKVQITLEGLGVPTEHVAEVLLQVAIYCKDVSSSSFMDSSGTFDWKGGSILS
FT                   DSVIAALRKDDNTLRRVCRLYAPITWNFMLTHKAPPSDWAAMGFKYSDRYAAFDCFEYV
FT                   ENPAAIQPAEGLIRKPTPSEKIAHNTYKRLALDKSNRNELYANLNTEVTGGTLGPEISR
FT                   NFNHAKK"
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SQ   Sequence 864 BP; 259 A; 170 C; 206 G; 229 T; 0 other;

jx020701 Length: 864  29-MAY-2012  Type: N  Check: 2478  ..

       1  atggagtcag tatttgattt aaataagtta gtggatagtg agatggctga
      51  aaaagcaaaa actggcgttc caaaagctgc ggacggcaca gcccttccag
     101  atattgatgc tgaattgcag aagaggttgg atgacttgag ggcttttcta
     151  agaaaaactc aaagtgcttc tgagatcact aatcctggtt ttgaacttgg
     201  cagacctgca ttgaaagagt ccacttttaa ctcagacaag catactcaca
     251  tttatgggaa gtggtcaatt gatcagctta gccgaatagt tccaaagaaa
     301  atatcaaata atatggcaac agctgaggaa atggctaaag ttcaaataac
     351  cctcgagggc ttgggggtac ctacagagca cgtggctgag gtacttttgc
     401  aagttgcaat ctattgcaaa gatgttagtt cctcaagctt catggattct
     451  agcggtacct ttgattggaa gggtggttcc atactgtcgg attcagtgat
     501  tgctgctttg aggaaggacg acaacaccct tcgtagggta tgtcgactgt
     551  atgccccaat aacttggaat ttcatgctta ctcacaaggc accaccttct
     601  gattgggccg ccatgggctt caaatactct gatcgatatg ccgcatttga
     651  ctgttttgag tatgttgaga atccagctgc cattcaaccc gctgaggggt
     701  tgataagaaa acctacaccc agtgagaaga ttgctcacaa cacatacaaa
     751  aggttagctc tggacaagtc aaatagaaat gagttgtatg ctaatctgaa
     801  tacagaggtg actggaggca cgttaggacc tgaaatttct cgcaatttca
     851  atcacgccaa gaag