Sequence of DPV Tomato mosaic virus

Tomato mosaic virus isolate P2 capsid protein (CP) gene, partial cds.

ACC No: JX025563

Dated: 2012-10-28 | Length: 480 | CRC: -2132141299

                
ID   JX025563; SV 1; linear; genomic RNA; STD; VRL; 480 BP.
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AC   JX025563;
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DT   16-JUL-2012 (Rel. 113, Created)
DT   28-OCT-2012 (Rel. 114, Last updated, Version 2)
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DE   Tomato mosaic virus isolate P2 capsid protein (CP) gene, partial cds.
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KW   .
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OS   Tomato mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Virgaviridae;
OC   Tobamovirus.
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RN   [1]
RP   1-480
RA   Ge B.B., Liu G.J., Wang H.Q.;
RT   "First Report of Tomato mosaic virus Infecting Pepino in China";
RL   Plant Dis. 96(11):1704-1704(2012).
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RN   [2]
RP   1-480
RA   Ge B., Li Q., He Z., Li S.;
RT   "First Report of Tomato mosaic virus Infecting Pepino in China";
RL   Unpublished.
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RN   [3]
RP   1-480
RA   Ge B., Li Q., He Z., Li S.;
RT   ;
RL   Submitted (07-MAY-2012) to the INSDC.
RL   State Key Laboratory for Biology of Plant Diseases and Insect Pests,
RL   Institute of Plant Protection, Chinese Academy of Agricultural Sciences,
RL   West 2 Yuanmingyuan Road, Haidian, Beijing 100193, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .480
FT                   /organism="Tomato mosaic virus"
FT                   /host="Solanum muricatum"
FT                   /isolate="P2"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collected_by="Beibei Ge"
FT                   /collection_date="02-Apr-2012"
FT                   /identified_by="Beibei Ge"
FT                   /db_xref="taxon:12253"
FT   gene            <1. .480
FT                   /gene="CP"
FT   CDS             <1. .480
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="capsid protein"
FT                   /note="coat protein"
FT                   /protein_id="AFN42537.1"
FT                   /translation="MSYSITSPSQFVFLSSVWADPIELLNVCTNSLGNQFQTQQARTTV
FT                   QQQFSEVWKPFPQSTVRFPGDVYKVYRYNAVLDPLITALLGAFDTRNRIIEVENQQSPT
FT                   TAETLDATRRVDDATVAIRSAINNLVNELVRGTGLYNQNTFESMSGLVWTCAPAS"
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SQ   Sequence 480 BP; 137 A; 96 C; 107 G; 140 T; 0 other;

jx025563 Length: 480  28-OCT-2012  Type: N  Check: 2150  ..

       1  atgtcttact caatcacttc tccatcgcaa tttgtgtttt tgtcatctgt
      51  atgggctgac cctatagaat tgttaaacgt ttgtacaaat tcgttaggta
     101  accagtttca aacacagcaa gcaagaacta ctgttcaaca gcagttcagc
     151  gaggtgtgga aacctttccc tcagagcacc gtcagatttc ctggcgatgt
     201  ttataaggtg tacaggtaca atgcagtttt agatcctcta attactgcgt
     251  tgctgggggc tttcgatact aggaatagaa taatcgaagt agaaaaccag
     301  cagagtccga caacagctga aacgttagat gctacccgca gggtagacga
     351  cgctacggtt gcaattcggt ctgctataaa taatttagtt aatgaactag
     401  taagaggtac tggactgtac aatcagaata cttttgaaag tatgtctggg
     451  ttggtctgga cctgtgcacc tgcatcttaa