Sequence of DPV Rice black streaked dwarf virus
Rice black streaked dwarf virus isolate AHCZ20 P8 gene, complete cds.
ACC No: JX047163
Dated: 2013-05-31 | Length: 1936 | CRC: 2019636817
ID JX047163; SV 1; linear; genomic RNA; STD; VRL; 1936 BP.
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AC JX047163;
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DT 31-MAY-2013 (Rel. 116, Created)
DT 31-MAY-2013 (Rel. 116, Last updated, Version 1)
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DE Rice black streaked dwarf virus isolate AHCZ20 P8 gene, complete cds.
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KW .
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OS Rice black streaked dwarf virus
OC Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Fijivirus;
OC Fijivirus group 2.
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RN [1]
RP 1-1936
RA Yin X., Li X.D.;
RT "Genetic diversity and population structure of Rice black-streaked dwarf
RT virus in China";
RL Unpublished.
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RN [2]
RP 1-1936
RA Yin X., Li X.D.;
RT ;
RL Submitted (10-MAY-2012) to the INSDC.
RL Department of Plant Pathology, Shandong Agricultural University, 61 Daizong
RL Street, Tai'an, Shandong 271018, China
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FH Key Location/Qualifiers
FH
FT source 1. .1936
FT /organism="Rice black streaked dwarf virus"
FT /segment="8"
FT /host="Zea mays"
FT /isolate="AHCZ20"
FT /mol_type="genomic RNA"
FT /country="China"
FT /collection_date="Aug-2008"
FT /db_xref="taxon:10990"
FT CDS 25. .1800
FT /codon_start=1
FT /product="P8"
FT /note="minor core protein"
FT /protein_id="AGE44010.1"
FT /translation="MTGTHDDRISLRLLFFNLWNKKRPNDPINHRKTKKKLKPQTANPT
FT SNPILVSPSITEYAEQISDEFAKARKPILVPTQIFSVFTRLETIFNRTGSYPDLFNNPI
FT KYLGFLIFMPDVSMHLDPPTVDHSYYNLKRNHKMSFDELQSNLTSRMLTGQIVKTETND
FT LAERFETYYFDPRCERTSIGFLKRTAIVRFEFLSYKYNNDLTLSEREKLPVWASHLIAR
FT MNVENVSLPLEISCSAINPTQHFAVIVLKNAKTNVTRGRFWTVLDDERDFLSVKTDIQA
FT IEFERNSVTTAGNLRHVLNNCLTLGEPFAFDPLDYSFKLNLLETGLSPLDDVVTIRLKD
FT LLRVFKEGQDVQIIGNKGVGKSEIGAMLAERYPHLLVVDSDDYGRFLVMLLNLVPSLFK
FT NFDFEINEELLTEEIYFQAMSDFIKAKQTEDVSLQTIFEYVMEGIILPNTIESGEANEE
FT VILDIFNRVFHSIQGSKFIGYRKFMIEYTRLMYTNFNKSQTCHFVHSYCELSFVPHSLA
FT YITLYSSYNSAVLNVVPRNGQVECSSSKMMANTLLHHFYERYTSNMNPTPVFLFSYFFG
FT LTKGLNVLKASSIIV"
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SQ Sequence 1936 BP; 607 A; 334 C; 327 G; 668 T; 0 other;
jx047163 Length: 1936 31-MAY-2013 Type: N Check: 6464 ..
1 aagttttttt cgcactgtct aaagatgact ggcacccatg acgaccggat
51 ttctttaaga cttttattct tcaacttatg gaacaaaaaa cgaccaaacg
101 acccaatcaa ccaccgaaaa acgaagaaaa agctaaaacc tcaaacagca
151 aatcctacat caaaccccat tttggtatcc ccttcaatta ctgagtatgc
201 tgaacaaata tcagacgaat tcgctaaagc tcgaaaaccg attttagtcc
251 cgacccaaat attttccgtt ttcactagac ttgaaacgat tttcaacaga
301 acaggctctt accctgattt gttcaataat ccaatcaaat acctcggatt
351 tttaattttc atgcccgatg tttcaatgca tttagatcct cccactgttg
401 atcattcata ttataatttg aagagaaatc ataagatgag ttttgatgaa
451 cttcaatcaa atttaacttc ccgaatgtta actggccaaa ttgtgaaaac
501 tgagactaat gatcttgcgg aacgttttga aacttattac tttgacccta
551 gatgtgaaag aacaagcatt ggatttttga aaagaaccgc gattgttaga
601 tttgaattct tatcttataa atacaacaat gatttaacac tgtcagaacg
651 tgaaaaatta cctgtttggg cttctcattt aatagctcgt atgaacgttg
701 aaaatgtttc tttaccattg gaaattagtt gtagtgcaat caatcccacc
751 caacattttg ctgttatagt tctcaaaaat gctaaaacca atgtgacaag
801 aggcagattc tggaccgtgt tggacgatga acgtgacttt ttatctgtta
851 aaaccgacat tcaagcgatt gaatttgaac gtaattccgt aaccactgct
901 ggcaatttaa gacatgtttt aaacaattgc ttaacattag gcgaaccctt
951 cgccttcgac ccacttgatt attcttttaa acttaactta cttgaaacag
1001 ggttatctcc attagatgac gttgtgacta ttagattgaa agatttgctg
1051 cgtgtgttta aagaaggaca ggatgttcaa attattggta ataaaggagt
1101 aggtaagtct gaaattggcg caatgttagc agaacgatat cctcatcttt
1151 tagttgttga tagtgatgat tatggtaggt ttttggtgat gttgcttaat
1201 ttagttcctt cattgtttaa aaattttgat tttgaaatta acgaagaact
1251 tttaaccgaa gaaatttatt ttcaagctat gtctgatttt attaaagcta
1301 aacaaactga agatgtttca cttcaaacga tttttgagta tgtaatggaa
1351 ggaataattc ttccaaacac cattgagagt ggagaagcta atgaggaagt
1401 tattttagac atttttaatc gtgtttttca tagtatccaa ggttctaaat
1451 ttattggata tcgtaagttc atgattgaat atacgcgtct gatgtacact
1501 aattttaaca agagtcaaac ttgtcatttc gttcactcgt attgtgaatt
1551 atcattcgtt cctcattctt tggcttacat tactttatac agtagttaca
1601 actcagctgt gttaaatgtt gttcctagaa acggacaagt agaatgcagt
1651 tcttcaaaga tgatggccaa tacgctactt catcattttt acgaaagata
1701 tacttctaat atgaatccaa ccccagtatt tttgttttct tatttctttg
1751 gtttaaccaa aggtttaaac gttttaaaag cttcatctat tattgtttaa
1801 cgttattatg cttttttgaa gaatatcatg tccttttagg gttcgactcg
1851 tataaaggtg tttcagtcca atgtcttgat ggcagactag gtcgattttt
1901 gattctagtg aagtgtgcga aaattcagct attgtc