Sequence of DPV Barley yellow dwarf virus-PAV

Barley yellow dwarf virus-PAV isolate SLG180_50 coat protein (ORF3) gene, complete cds.

ACC No: JX067828

Dated: 2012-10-08 | Length: 603 | CRC: 1031023393

                
ID   JX067828; SV 1; linear; genomic RNA; STD; VRL; 603 BP.
XX
AC   JX067828;
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DT   08-OCT-2012 (Rel. 114, Created)
DT   08-OCT-2012 (Rel. 114, Last updated, Version 1)
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DE   Barley yellow dwarf virus-PAV isolate SLG180_50 coat protein (ORF3) gene,
DE   complete cds.
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KW   .
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OS   Barley yellow dwarf virus-PAV
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Luteovirus.
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RN   [1]
RP   1-603
RA   Mar T.B., Lau D., Schons J., Lau E.Y., Nhani A.;
RT   "Cloning and Phylogenetic Analysis of Coat Protein of Barley yellow dwarf
RT   virus Isolates from Brazil";
RL   Unpublished.
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RN   [2]
RP   1-603
RA   Mar T.B., Lau D., Schons J., Lau E.Y., Nhani A.;
RT   ;
RL   Submitted (11-MAY-2012) to the INSDC.
RL   CNPT, EMBRAPA, BR285 KM 294, Passo Fundo, RS 99001970, Brazil
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FH   Key             Location/Qualifiers
FH
FT   source          1. .603
FT                   /organism="Barley yellow dwarf virus-PAV"
FT                   /host="oat"
FT                   /isolate="SLG180_50"
FT                   /serotype="PAV"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /collection_date="Jul-2008"
FT                   /db_xref="taxon:12040"
FT   gene            1. .603
FT                   /gene="ORF3"
FT   CDS             1. .603
FT                   /codon_start=1
FT                   /gene="ORF3"
FT                   /product="coat protein"
FT                   /protein_id="AFU48509.1"
FT                   /translation="MNSVGRRGPRRANQNGPRRRRRRTIRPVVVVQPNRAGPRRRNGRR
FT                   KGRGGANPVFRPTGGTEVFVFSVDNLKANSSGAIKFGPSLSQCPALSDGILKSYHRYKI
FT                   TSIRVEFKSHASATTAGAIFIELDTACKQSALGSYINSFTISKTASKVFRAEAINGKEF
FT                   QESTIDQFWMLYKANGTTTDTAGQFIITMSVSLMTAK"
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SQ   Sequence 603 BP; 177 A; 159 C; 147 G; 120 T; 0 other;

jx067828 Length: 603  08-OCT-2012  Type: N  Check: 6432  ..

       1  atgaattcag taggccgtag aggacctaga cgcgcaaatc aaaatggccc
      51  aagaaggagg cgccgtagaa caattcggcc agtggttgtg gtccaaccca
     101  atcgagcagg acccagacga cgaaatggtc gacgcaaggg aagaggaggg
     151  gcaaatcctg tatttagacc aacaggcggg actgaggtat tcgtattctc
     201  agttgacaac cttaaagcca actcctccgg ggcaatcaaa ttcggcccca
     251  gtctatcgca atgcccagcg ctttcagacg gaatactcaa gtcctaccat
     301  cgttacaaga tcacaagtat ccgagttgag tttaagtcac acgcgtccgc
     351  cactacggcc ggcgctatct ttattgaact cgacaccgcg tgcaagcaat
     401  cagccctggg tagctacatt aattccttca ccatcagcaa gaccgcctcc
     451  aaggtcttcc gggcagaggc aattaacggg aaggaattcc aggaatcaac
     501  gatagaccaa ttttggatgc tctacaaggc taatggaacc accactgaca
     551  ctgcaggaca attcatcatc acgatgagtg tcagtttgat gacggccaaa
     601  tag