Sequence of DPV Panax virus Y

Panax virus Y isolate YQBe9 coat protein gene, partial cds.

ACC No: JX106467

Dated: 2012-08-16 | Length: 834 | CRC: 767649886

                
ID   JX106467; SV 1; linear; genomic RNA; STD; VRL; 834 BP.
XX
AC   JX106467;
XX
DT   16-AUG-2012 (Rel. 113, Created)
DT   16-AUG-2012 (Rel. 113, Last updated, Version 1)
XX
DE   Panax virus Y isolate YQBe9 coat protein gene, partial cds.
XX
KW   .
XX
OS   Panax virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus; unclassified Potyvirus.
XX
RN   [1]
RP   1-834
RA   Li F.;
RT   ;
RL   Submitted (29-MAY-2012) to the INSDC.
RL   Plant Protection College, Yunnan Agricultural University, Key Laboratory of
RL   Agricultural Biodiversity for Pest Management of China's Education
RL   Ministry, Yunnan Agricultural University, Kunming, Yunnan 650201, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .834
FT                   /organism="Panax virus Y"
FT                   /host="Panax notoginseng"
FT                   /isolate="YQBe9"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Yunnan Wenshan"
FT                   /collection_date="20-Jul-2011"
FT                   /db_xref="taxon:796352"
FT   CDS             <1. .>834
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /protein_id="AFP73408.1"
FT                   /translation="ADKTTTMDAGESSGDSSKKNDKNKDKQQQLTPTSDQNKSVSTPNK
FT                   DKDVDAGSSGTYRVPKLKAISAKMRVPKYNNKNSMNLEFLLNYSPEQIDITNTRSTQAQ
FT                   YQAWYEGVKNDYDVSDQDMEVLLSGLMVWCLENGTSPNLNGMWTMMDGEEQREYPIKPL
FT                   IDHAKPTFRQIMHHFSDVAVAYIEMRNTKKPYMPGYGLKRNLRDRSLACYAFDFYEMTS
FT                   SSPERAREAHLQMKAAALKNSRTRLFGLDGSVSSKEEDTERHTVEDVNRNMHSLLG"
XX
SQ   Sequence 834 BP; 298 A; 165 C; 193 G; 178 T; 0 other;

jx106467 Length: 834  16-AUG-2012  Type: N  Check: 383  ..

       1  gcagacaaga caacaacaat ggacgcaggg gaatccagtg gcgatagttc
      51  aaagaaaaat gataaaaaca aagacaaaca acaacagcta accccaacaa
     101  gtgatcaaaa caagtcggta tcaactccga acaaggataa agacgtggac
     151  gcgggctcat cagggacata ccgtgtgccg aaactaaaag ctatatcggc
     201  aaagatgcgg gtacccaaat acaataataa aaactcgatg aatttggagt
     251  tcttactcaa ttactctcca gaacagattg acattactaa caccagatca
     301  acacaagcac aatatcaggc gtggtatgaa ggtgttaaga atgattatga
     351  tgttagtgat caagacatgg aagttttatt gagtggttta atggtttggt
     401  gtctcgaaaa cggaacatca ccaaacttaa atggaatgtg gacgatgatg
     451  gatggtgagg agcaacggga atacccgata aaaccattga tcgatcatgc
     501  caagcccaca tttaggcaga taatgcacca tttcagtgac gtagctgtcg
     551  cgtacattga aatgcgtaac acaaagaaac catatatgcc cggatatggc
     601  ttaaaacgaa acttaagaga tagaagctta gcttgctacg cttttgactt
     651  ctacgaaatg acctcaagct cacctgaaag agctagggag gcacacctgc
     701  aaatgaaagc agcggctctt aagaattcaa ggaccaggtt atttggcctt
     751  gatggcagtg ttagtagcaa ggaagaggac acggagaggc acactgttga
     801  agatgttaat cgaaacatgc actccctgct tggc