Sequence of DPV Turnip mosaic virus

Turnip mosaic virus strain BJ-B04 P3 protein gene, partial cds.

ACC No: JX138352

Dated: 2012-08-22 | Length: 1065 | CRC: 1203548338

                
ID   JX138352; SV 1; linear; genomic RNA; STD; VRL; 1065 BP.
XX
AC   JX138352;
XX
DT   22-AUG-2012 (Rel. 113, Created)
DT   22-AUG-2012 (Rel. 113, Last updated, Version 1)
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DE   Turnip mosaic virus strain BJ-B04 P3 protein gene, partial cds.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1065
RA   Yao L., Zeng G., Ye Y., Ma R.;
RT   ;
RL   Submitted (05-JUN-2012) to the INSDC.
RL   Beijing Agro-Biotechnology Research Center, Beijing Academy of Agriculture
RL   and Forestry Sciences, 9 Shuguang Huayuan Zhonglu, Beijing 100097, P.R.
RL   China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1065
FT                   /organism="Turnip mosaic virus"
FT                   /host="cabbage"
FT                   /strain="BJ-B04"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Beijing"
FT                   /isolation_source="leaves"
FT                   /collection_date="Sep-2009"
FT                   /db_xref="taxon:12230"
FT   CDS             <1. .>1065
FT                   /codon_start=1
FT                   /product="P3 protein"
FT                   /protein_id="AFP97540.1"
FT                   /translation="GTEWEDTHGASNIDDPQWCIKRLIKGVYRPKQLKEDMLANPFLPL
FT                   YALLSPGVILAFYNSGSLEYLMNHYIRVDSNVAVLLVVLKSLAQKVSTSQSVLAQLQII
FT                   ERSLPELVEAKANVNGSDNAASRACNRFMGMLLHMAEPNWELADGGYTVLRDHSISILE
FT                   KSYLQILDEAWNELSWSERCAIRYYSSKQAIFTQKDLPMKSDVDLGGRYSVSVMSSYEW
FT                   SKQCMKSVYSSIGSRLRSSVSWTSSKVSNSVCKTINYLVPDVFKFVNVLVCISLLITMA
FT                   AEANRIVTTQKRLKLDVEETERRKVEWELAFHHAILTQSAGQHPTIDEFRAYIADKAPH
FT                   LSEHIEPEEKMVVHQ"
XX
SQ   Sequence 1065 BP; 332 A; 208 C; 259 G; 266 T; 0 other;

jx138352 Length: 1065  22-AUG-2012  Type: N  Check: 2905  ..

       1  ggaacagagt gggaggatac tcatggagcc agcaacatag atgatccgca
      51  gtggtgcatc aagaggctca taaaaggagt ttacagacca aagcaactga
     101  aagaagacat gttggcgaac cctttcttac cactatatgc cctattgtca
     151  ccaggtgtca tcctggcatt ttacaatagt ggctctctag agtacttaat
     201  gaatcattac atcagagtag acagcaacgt cgccgtttta ttggtcgttt
     251  tgaaatctct agcgcagaag gtatcaacta gccagagtgt gttagcccag
     301  ctccaaatca ttgaacgaag tctacctgaa cttgtcgaag caaaggctaa
     351  tgttaatggg tcagataacg cagcctcgcg cgcgtgtaac agattcatgg
     401  gcatgctttt gcacatggca gaaccaaatt gggagctcgc agatggtgga
     451  tacacagttc tgagagatca tagtatctcc attcttgaaa aaagttatct
     501  acagatcttg gacgaagcat ggaacgagtt aagctggtcg gagcgctgtg
     551  ctataagata ctactcgtca aagcaagcaa tttttacaca gaaagatttg
     601  ccaatgaaaa gcgacgtcga tttaggcggc agatacagcg tgtcagtcat
     651  gtcatcttac gaatggagta agcaatgtat gaaaagcgta tactctagta
     701  taggcagtag attacgtagt agtgtgtctt ggactagtag caaggtatcg
     751  aatagcgtgt gtaagactat aaattattta gtaccggatg tgttcaagtt
     801  tgtgaatgtg cttgtttgta ttagcttatt aatcacaatg gctgctgagg
     851  caaatcgcat cgtcaccacg caaaagagac tcaaactgga tgtcgaggag
     901  acagagcgca ggaaagtaga atgggagctt gcattccatc acgctattct
     951  gacacagagt gcaggtcaac acccaacgat agatgagttc agagcataca
    1001  tcgctgacaa agcaccacat ctaagtgagc atattgagcc tgaagaaaag
    1051  atggtagttc atcaa