Sequence of DPV Groundnut bud necrosis virus

Peanut bud necrosis virus isolate Dharawad nucleocapsid protein gene, complete cds.

ACC No: JX198660

Dated: 2012-08-28 | Length: 831 | CRC: -2051173173

                
ID   JX198660; SV 1; linear; genomic RNA; STD; VRL; 831 BP.
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AC   JX198660;
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DT   28-AUG-2012 (Rel. 113, Created)
DT   28-AUG-2012 (Rel. 113, Last updated, Version 1)
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DE   Peanut bud necrosis virus isolate Dharawad nucleocapsid protein gene,
DE   complete cds.
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KW   .
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OS   Peanut bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-831
RA   Sivaprasad Y., Bhaskara Reddy B.V., Sujitha A., Sai Gopal D.V.R.;
RT   "Molecular characterization of peanut bud necrosis virus infecting various
RT   crops in India";
RL   Unpublished.
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RN   [2]
RP   1-831
RA   Sivaprasad Y., Bhaskara Reddy B.V., Sujitha A., Sai Gopal D.V.R.;
RT   ;
RL   Submitted (20-JUN-2012) to the INSDC.
RL   Plant Pathology, Institute of Frontier Technology, Regional Agricultural
RL   Research Station, Acharaya N.G. Ranga Agricultural University, Tirupati,
RL   Andhra Pradesh 517502, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .831
FT                   /organism="Peanut bud necrosis virus"
FT                   /host="Arachis hypogaea (groundnut)"
FT                   /isolate="Dharawad"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Dharwad, Karnataka"
FT                   /collection_date="Jan-2012"
FT                   /db_xref="taxon:40687"
FT   CDS             1. .831
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /protein_id="AFQ36778.1"
FT                   /translation="MSNVKQLTEKKIKELLAGGSADVEIETEDSTPGFSFKAFYDTNKN
FT                   LEITFTNCLNILKCRKQIFAACKSGKYVFCGKTIVATNTDVGPDDWTFKRTEAFIRTKM
FT                   ASMVEKSKNDAAKQEMYNKIMELPLVAAYGLNVPASFDTCALRMMLCIGGPLPLLSSMT
FT                   GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSAPQIEFKNELEEMFKSAVKL
FT                   LSESNPGTASSISLKKYDEQVKYMDKAFSASLSMDDYGEHSKKKSSKAGPSLEL"
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SQ   Sequence 831 BP; 275 A; 144 C; 176 G; 236 T; 0 other;

jx198660 Length: 831  28-AUG-2012  Type: N  Check: 1718  ..

       1  atgtctaacg tcaagcaact caccgagaag aaaatcaaag aacttttggc
      51  tggtggctct gcagatgttg aaattgaaac agaagattcc actcccggat
     101  ttagctttaa agctttctat gatactaaca aaaatcttga aataactttc
     151  acaaactgtt tgaatatttt gaagtgcagg aagcagatct ttgctgcttg
     201  taaaagtggt aagtatgttt tttgtggtaa aactattgtt gctacaaata
     251  ctgacgtagg gccagatgac tggaccttca aaaggacaga agctttcatc
     301  aggaccaaaa tggctagtat ggttgagaag agcaagaatg atgctgctaa
     351  gcaggagatg tacaataaaa taatggaatt accattagtg gcagcttatg
     401  gattaaatgt tcctgcatct ttcgatacat gtgctttaag gatgatgctc
     451  tgcattggag gtcctctgcc tctcttgtct agcatgacag gtctggcacc
     501  aattatattc cctctggctt attatcaaaa tgtgaagaaa gagaaattag
     551  gaattaagaa cttttctact tatgaacagg tttgcaaagt agccaaagta
     601  ctttctgccc cacagattga attcaaaaat gaactagagg aaatgtttaa
     651  atcagctgta aagctattga gtgagagcaa ccctggaaca gccagctcta
     701  tctcactcaa gaaatatgat gaacaagtca aatacatgga caaagctttc
     751  agtgccagtc tctcaatgga tgattatggt gaacattcta agaagaagag
     801  ttcaaaggct ggtccttcgc tggaattgta a