Sequence of DPV Carnation mottle virus

Carnation mottle virus isolate MG 1669 coat protein gene, partial cds.

ACC No: JX207141

Dated: 2012-09-05 | Length: 1026 | CRC: 1417605957

                
ID   JX207141; SV 1; linear; genomic RNA; STD; VRL; 1026 BP.
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AC   JX207141;
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DT   05-SEP-2012 (Rel. 114, Created)
DT   05-SEP-2012 (Rel. 114, Last updated, Version 1)
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DE   Carnation mottle virus isolate MG 1669 coat protein gene, partial cds.
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KW   .
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OS   Carnation mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae;
OC   Carmovirus.
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RN   [1]
RP   1-1026
RA   Alexandre M.A.V., Duarte L.M.L., Harakava R.;
RT   "Identification and characterization of Brazilian isolates of Carnation
RT   mottle virus";
RL   Unpublished.
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RN   [2]
RP   1-1026
RA   Alexandre M.A.V., Duarte L.M.L., Harakava R.;
RT   ;
RL   Submitted (19-JUN-2012) to the INSDC.
RL   Plant Virology, Instituto Biologico, Av. Conselheiro Rodrigues Alves, 1252,
RL   Sao Paulo, SP 04150080, Brazil
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1026
FT                   /organism="Carnation mottle virus"
FT                   /host="carnation"
FT                   /isolate="MG 1669"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /collection_date="19-Aug-2011"
FT                   /db_xref="taxon:11986"
FT   CDS             <1. .>1026
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AFQ94060.1"
FT                   /translation="KIAMNPTVQTLAQKGDKLAVKLVTRGWASLSTNQKRRAEMLAGYT
FT                   PAILAFTPRRPRMTNLPPRTSRNSPGQAGKSMTMSKTELLSTVKGTTGVIPSFEDWVVS
FT                   PRNVAVFPQLSLLATNFNKYRITALTVKYSPACSFETNGRVALGFNDDASDTPPTTKVG
FT                   FYDLGKHVETAAQTAKDLVIPVDGKTRFIRDSASDDAKLVDFGRIVLSTYGFDKADTVV
FT                   GELFIQYTIVLSDPTKTAKISQASNDKVSDGPTYVVPLVNGNELQLRVVAAGKWCIIVR
FT                   GTVEGGFTKPTLIGPGISGDVDYESARPIAICELVTQMEGQILKITKTSAEQPLQWVVY
FT                   RM"
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SQ   Sequence 1026 BP; 290 A; 248 C; 274 G; 214 T; 0 other;

jx207141 Length: 1026  05-SEP-2012  Type: N  Check: 4835  ..

       1  aagatcgcga tgaatcccac tgtgcaaaca ttggcgcaga agggggacaa
      51  gttagccgtg aagttggtga caagggggtg ggcctctctg agtacgaacc
     101  agaagaggag agctgaaatg cttgctggat acactccagc gatcctagcc
     151  ttcacacccc gacgaccacg gatgacgaac cttcctccaa gaaccagtag
     201  gaattcacca ggacaagctg gaaagtccat gacgatgagt aagaccgaac
     251  tattaagcac cgtcaaaggt accactggtg ttatcccaag ctttgaagac
     301  tgggtcgttt ccccccgaaa cgtagccgtc ttccctcaac tctcgctgct
     351  ggcgacgaac ttcaacaagt accgcatcac tgcgctcact gtgaagtact
     401  cacccgcgtg cagcttcgag accaatggga gggtggctct gggattcaac
     451  gatgacgctt cggatacacc accaaccacc aaggttggat tttacgatct
     501  gggcaaacat gtggaaactg ctgcacagac agctaaggat ctagtgatac
     551  cagtagacgg caaaacccgg ttcatcaggg actcggctag tgatgatgcc
     601  aaactagtcg attttggacg gatagtcttg tcaacatacg ggtttgacaa
     651  ggctgacact gtggtgggcg aattattcat acagtacacg attgtactga
     701  gtgacccaac caagacggcc aaaatttcac aggcaagcaa cgataaggtg
     751  tcggacggac caacgtatgt ggtccctttg gttaatggca acgagctaca
     801  actaagagtg gtagccgctg ggaaatggtg cattatagtg cggggtacgg
     851  ttgagggagg cttcaccaaa cccacactta ttgggccagg aatcagcggt
     901  gatgtggact atgaaagtgc cagacctatc gccatttgtg aattggtgac
     951  acaaatggag ggccagatat tgaaaatcac caagacctca gcagaacaac
    1001  cactccaatg ggttgtttat aggatg