Sequence of DPV Narcissus latent virus

Narcissus latent virus isolate NLV1 polyprotein gene, partial cds.

ACC No: JX270761

Dated: 2012-09-19 | Length: 1210 | CRC: -917796196

                
ID   JX270761; SV 1; linear; genomic RNA; STD; VRL; 1210 BP.
XX
AC   JX270761;
XX
DT   19-SEP-2012 (Rel. 114, Created)
DT   19-SEP-2012 (Rel. 114, Last updated, Version 1)
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DE   Narcissus latent virus isolate NLV1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Narcissus latent virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Macluravirus.
XX
RN   [1]
RP   1-1210
RA   Sochacki D., Komorowska B., Berniak H.;
RT   "Molecular characterization of Polish isolates of Narcissus latent virus";
RL   Unpublished.
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RN   [2]
RP   1-1210
RA   Sochacki D., Komorowska B., Berniak H.;
RT   ;
RL   Submitted (04-JUL-2012) to the INSDC.
RL   Plant Protection, Research Institute of Horticulture, Konstytucji 3 Maja
RL   1/3, Skierniewice, Lodzkie 96-100, Poland
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1210
FT                   /organism="Narcissus latent virus"
FT                   /host="Narcissus sp.; cultivar Dutch Master"
FT                   /isolate="NLV1"
FT                   /mol_type="genomic RNA"
FT                   /country="Poland"
FT                   /collection_date="19-May-2011"
FT                   /db_xref="taxon:48200"
FT   CDS             <1. .1077
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="AFR68855.1"
FT                   /translation="YKDVLLYAQENDLGSVCYMDPCQVFALHYGSSEGLESVDFESDNE
FT                   SANDADDDVTPSLELQMDVESLIPEKGKNAKNTNKDEQSKRTDATAQGESSSPLKSSTE
FT                   EAANRGDTNPPQGDPLVDDEIVEWVIPKMSSNIVTSPVPVVNGKKLWKRGILKNMPKIM
FT                   FSTTSTMATQVQLTSWVEEVKKSLALKTDDAWTVVITNWCIWCANNGTSSEIDTSQNME
FT                   IRDGFGKVQEVPIEIFVNPAVENGGLRKIMRHFSGITYEILKVGKQMTAWGNKRGFTEK
FT                   SMIPYAFDYYVVTNTTPKTVREQLAQSKAAAIGSGTVRKMILDGNIQGSHASYERHVDT
FT                   DNSEYEHGSSVDQRPYLT"
FT   mat_peptide     <1. .183
FT                   /product="NIb"
FT   mat_peptide     184. .>1074
FT                   /product="coat protein"
FT   3'UTR           1078. .>1210
XX
SQ   Sequence 1210 BP; 370 A; 236 C; 294 G; 310 T; 0 other;

jx270761 Length: 1210  19-SEP-2012  Type: N  Check: 377  ..

       1  tataaggatg ttttgttgta cgctcaagag aacgacttgg gatcagtttg
      51  ttacatggac ccatgtcagg tgttcgcact acactatggg tcatctgaag
     101  gtttggagag cgtggatttc gagagtgaca acgagagtgc aaatgatgct
     151  gatgatgacg tcacgcccag cttggaactc cagatggatg tcgagagtct
     201  gattcctgag aaagggaaaa acgctaagaa cacgaacaaa gacgaacaaa
     251  gcaagcgaac tgatgcgact gctcaaggcg agtcaagtag ccctctcaag
     301  agcagcacag aggaggccgc caaccgaggt gacacaaatc caccacaagg
     351  agatccttta gttgatgatg agatagtcga atgggtcatt ccaaaaatga
     401  gttcaaacat tgtgacctca ccagtgccag ttgtcaatgg caagaaactg
     451  tggaagcgag gaatcctgaa aaacatgccg aaaataatgt tcagcacaac
     501  ttcaaccatg gcaactcaag ttcaactaac atcatgggtt gaggaagtta
     551  agaaatcact cgccctcaaa acagatgatg cgtggacggt tgtaatcaca
     601  aattggtgca tttggtgcgc taacaatggc acctcatctg aaattgacac
     651  atcacagaat atggaaattc gtgatggttt tggaaaagtt caagaagtcc
     701  ccatcgaaat ttttgttaat ccagctgttg agaatggtgg gctacggaaa
     751  atcatgaggc atttttctgg cataacatat gaaattttga aggttggtaa
     801  gcaaatgaca gcctggggga acaagagggg ttttactgag aaatcgatga
     851  tcccctacgc ttttgactac tatgtcgtca caaacacaac accgaagact
     901  gtgcgtgagc aattggctca atcgaaagca gcagcaattg gctcaggcac
     951  ggtgagaaag atgattcttg atggaaacat acaagggtca cacgctagtt
    1001  atgaacgaca tgtcgacacg gacaatagcg aatatgagca tggttccagt
    1051  gttgaccaga ggccctatct tacttaagtt ctgcgttctt gaacgtttga
    1101  acttaataat ttatatttgc attatatgag ttttctttga agcttatttt
    1151  ctctcttttc tctttgagct ctaagggtta aatgggggtt tgtttgccat
    1201  tgttcctcca