Sequence of DPV Narcissus latent virus

Narcissus latent virus isolate NLV3 polyprotein gene, partial cds.

ACC No: JX270762

Dated: 2012-09-19 | Length: 1216 | CRC: -1537110434

                
ID   JX270762; SV 1; linear; genomic RNA; STD; VRL; 1216 BP.
XX
AC   JX270762;
XX
DT   19-SEP-2012 (Rel. 114, Created)
DT   19-SEP-2012 (Rel. 114, Last updated, Version 1)
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DE   Narcissus latent virus isolate NLV3 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Narcissus latent virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Macluravirus.
XX
RN   [1]
RP   1-1216
RA   Sochacki D., Komorowska B., Berniak H.;
RT   "Molecular characterization of Polish isolates of Narcissus latent virus";
RL   Unpublished.
XX
RN   [2]
RP   1-1216
RA   Sochacki D., Komorowska B., Berniak H.;
RT   ;
RL   Submitted (04-JUL-2012) to the INSDC.
RL   Plant Protection, Research Institute of Horticulture, Konstytucji 3 Maja
RL   1/3, Skierniewice, Lodzkie 96-100, Poland
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1216
FT                   /organism="Narcissus latent virus"
FT                   /host="Narcissus sp.; cultivar Dutch Master"
FT                   /isolate="NLV3"
FT                   /mol_type="genomic RNA"
FT                   /country="Poland"
FT                   /collection_date="19-May-2011"
FT                   /db_xref="taxon:48200"
FT   CDS             <1. .1083
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="AFR68856.1"
FT                   /translation="VTYKDVLLYAQENDLGSVCYMDPCQVFALHYGSSEGLESVDFESD
FT                   NESANDADDDVTPSLELQMDVESLIPEKGKNAKNTNKDEQSKRTDATAQGESSSPLKSS
FT                   TEEAANRGDTNPPQGDPLVDDEIVEWVIPKMSSNIVTSPVPVVNGKKLWKRGILKNMPK
FT                   IMFSTTSTMATQVQLTSWVEEVKKSLALRTDDAWTVVITNWCIWCANNGTSSEIDTSQN
FT                   MEIRDSFGKVQEVPIEIFVNPAVENGGLRKIMRHFSGITYEILKVGKQMTAWGNKRGFT
FT                   EKSMIPYAFDYYVVTNTTPKTVREQLAQSKAAAIGSGTVRKMILDGNIQGSHASYERHV
FT                   DTDNSEYEHGSSVDQRPYLT"
FT   mat_peptide     <1. .189
FT                   /product="NIb"
FT   mat_peptide     190. .>1080
FT                   /product="coat protein"
FT   3'UTR           1084. .>1216
XX
SQ   Sequence 1216 BP; 372 A; 233 C; 295 G; 316 T; 0 other;

jx270762 Length: 1216  19-SEP-2012  Type: N  Check: 8482  ..

       1  gtcacttata aggatgtttt gttgtacgct caagagaacg acttgggatc
      51  agtttgttac atggacccat gtcaggtgtt cgcactacac tatgggtcat
     101  ctgaaggttt ggagagcgtg gatttcgaga gtgataacga gagtgcaaat
     151  gatgctgatg atgacgtcac gcccagcttg gaactccaga tggatgtcga
     201  gagtctgatt cctgagaaag ggaaaaatgc taagaacacg aacaaagacg
     251  aacaaagcaa gcgaactgat gcgactgctc aaggcgagtc aagtagccct
     301  ctcaagagca gcacagagga ggccgccaac cgaggtgaca caaatccacc
     351  acaaggagat cctttagttg atgatgagat agtcgaatgg gtcattccaa
     401  aaatgagttc aaacattgtg acctcaccag tgccagttgt caatggcaag
     451  aaactgtgga agcgaggaat cctgaaaaac atgccgaaaa taatgttcag
     501  cacaacttca accatggcaa ctcaagttca actaacatca tgggttgagg
     551  aagttaagaa atcactcgcc ctcagaacag atgatgcgtg gacggttgta
     601  attacaaatt ggtgcatttg gtgcgctaac aatggcacct catctgaaat
     651  tgacacatca cagaatatgg aaattcgtga tagttttgga aaagttcaag
     701  aagtccccat tgaaattttt gttaatccag ctgttgagaa tggtgggcta
     751  cggaaaatca tgaggcattt ttctggcata acatatgaaa ttttgaaggt
     801  tggtaagcaa atgacagcct gggggaacaa gaggggtttt actgagaaat
     851  cgatgatccc ctacgctttt gactactatg tcgtcacaaa cacaacaccg
     901  aagactgtgc gtgagcaatt ggctcaatcg aaagcagcag caattggctc
     951  aggcacggtg agaaagatga ttcttgatgg aaacatacaa gggtcacacg
    1001  ctagttatga acgacatgtc gacacggaca atagcgaata tgaacatggt
    1051  tccagtgttg accagaggcc ctatcttact taagttctgc gttcttgaac
    1101  gtttgaactt aataatttat atttgcatta tatgagtttt ctttgaagct
    1151  tattttctct cttttctctt tgagctttaa gggttaaatg ggggtttgtt
    1201  tgccatgtct ccagct