Sequence of DPV Narcissus latent virus

Narcissus latent virus isolate NLV5_2 polyprotein gene, partial cds.

ACC No: JX270763

Dated: 2012-09-19 | Length: 1258 | CRC: 104073301

                
ID   JX270763; SV 1; linear; genomic RNA; STD; VRL; 1258 BP.
XX
AC   JX270763;
XX
DT   19-SEP-2012 (Rel. 114, Created)
DT   19-SEP-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Narcissus latent virus isolate NLV5_2 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Narcissus latent virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Macluravirus.
XX
RN   [1]
RP   1-1258
RA   Sochacki D., Komorowska B., Berniak H.;
RT   "Molecular characterization of Polish isolates of Narcissus latent virus";
RL   Unpublished.
XX
RN   [2]
RP   1-1258
RA   Sochacki D., Komorowska B., Berniak H.;
RT   ;
RL   Submitted (04-JUL-2012) to the INSDC.
RL   Plant Protection, Research Institute of Horticulture, Konstytucji 3 Maja
RL   1/3, Skierniewice, Lodzkie 96-100, Poland
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1258
FT                   /organism="Narcissus latent virus"
FT                   /host="Narcissus sp.; cultivar Dutch Master"
FT                   /isolate="NLV5_2"
FT                   /mol_type="genomic RNA"
FT                   /country="Poland"
FT                   /collection_date="19-May-2011"
FT                   /db_xref="taxon:48200"
FT   CDS             <1. .1113
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="AFR68857.1"
FT                   /translation="VMHSYLVWLLVTYKDVLLYAQENDLGSVCYMDPCQVFALHYGSSE
FT                   GLESVDFESDNESANDVDDDVTPSLELQMDVESLISEKGKNAKSTNKGEQSKRTDATAR
FT                   GESSSPLQSSTEEAANRGDINPPQGDPLVDDEMVEWVIPKMSSNIVTSPVPVVNGKKLW
FT                   KRGILRNMPKIMFSTTSTMATQVQLTSWVEEVKKSLALKTDDAWTVIITNWCIWCANNG
FT                   TSSEIDTSQNMEIRDGLGKVQEVPIEIFVNPAVENGGLRKIMRHFSGITYEILKVGKQM
FT                   TAWGNKRGFTEKSMIPYAFDYYVVTNTTPKTVREQLAQSKAAAIGSGTVRKMILDGNIQ
FT                   GSHASYERHVDTDNSEYEHGSSADQRPYLT"
FT   mat_peptide     <1. .219
FT                   /product="NIb"
FT   mat_peptide     220. .>1110
FT                   /product="coat protein"
FT   3'UTR           1114. .>1258
XX
SQ   Sequence 1258 BP; 372 A; 248 C; 311 G; 327 T; 0 other;

jx270763 Length: 1258  19-SEP-2012  Type: N  Check: 841  ..

       1  gttatgcact catatttggt gtggctctta gtcacttata aggatgtttt
      51  gttgtacgct caagagaacg acttgggatc agtttgttac atggacccat
     101  gtcaggtgtt cgcactacac tatgggtcat ctgaaggttt ggagagcgtg
     151  gatttcgaga gtgacaacga gagtgcaaat gatgttgatg atgacgtcac
     201  gcccagcttg gaactccaga tggatgtcga gagtttgatt tctgagaaag
     251  ggaaaaacgc taagagcacg aacaaaggcg aacaaagcaa gcgaactgat
     301  gcgactgctc gaggcgagtc gagtagccct ctccagagca gcacagagga
     351  ggccgccaac cgaggtgaca taaatccacc acaaggagat cctttagtcg
     401  atgatgagat ggtcgaatgg gtcattccaa aaatgagttc aaacattgtg
     451  acctcaccag tgccagttgt caatggcaag aaactgtgga agcgaggaat
     501  cctgagaaac atgccgaaaa taatgttcag cacaacttca accatggcaa
     551  ctcaagttca actaacgtca tgggttgagg aagttaagaa atcactcgcc
     601  ctcaaaacag atgacgcgtg gacggttata atcacaaatt ggtgcatttg
     651  gtgcgctaac aatggcacct catctgaaat tgacacatca cagaatatgg
     701  aaattcgtga tggtcttgga aaagttcaag aagtccccat cgaaattttt
     751  gttaatccag ctgttgagaa tggcgggcta cggaaaatca tgaggcattt
     801  ttctggcata acgtatgaaa ttttgaaggt tggtaagcaa atgacagcct
     851  gggggaacaa gaggggtttt actgagaaat cgatgatccc ctacgctttt
     901  gactactatg tcgtcacaaa cacaacaccg aagactgtgc gtgagcaact
     951  ggctcaatcg aaagcagcag caattggctc aggcacggtg agaaagatga
    1001  ttcttgatgg aaacatacaa gggtcacacg ctagttatga acgacatgtc
    1051  gacacggaca atagcgaata tgagcatggt tccagtgctg accagaggcc
    1101  ctatcttact taagttctgc gttcttgaac gtttgaactt aataatttat
    1151  atttgcatta tatgagtttt ctttgaagct tattttctct ctcttctttt
    1201  tgagctttaa gggttaaatg ggggtttgtt tgccattgtt cctccaatgc
    1251  cctgaaat