Sequence of DPV Zucchini yellow mosaic virus

Zucchini yellow mosaic virus isolate ZYMV-DF coat protein gene, partial cds.

ACC No: JX502667

Dated: 2012-10-28 | Length: 837 | CRC: 1074842630

                
ID   JX502667; SV 1; linear; genomic RNA; STD; VRL; 837 BP.
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AC   JX502667;
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DT   28-OCT-2012 (Rel. 114, Created)
DT   28-OCT-2012 (Rel. 114, Last updated, Version 1)
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DE   Zucchini yellow mosaic virus isolate ZYMV-DF coat protein gene, partial
DE   cds.
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KW   .
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OS   Zucchini yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-837
RA   Spadotti D.Sr.;
RT   "Biological, serological and molecular characterization of Brazilian
RT   isolates of Zucchini yellow mosaic virus";
RL   Unpublished.
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RN   [2]
RP   1-837
RA   Spadotti D.Sr.;
RT   ;
RL   Submitted (17-AUG-2012) to the INSDC.
RL   Fitopatologia, ESALQ, Avenida Padua Dias, 11, Piracicaba, SP 13418-900,
RL   Brazil
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CC   ##Assembly-Data-START##
CC   Assembly Method       :: Electropherogram quality analysis v.
CC                            06/01/2012
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1. .837
FT                   /organism="Zucchini yellow mosaic virus"
FT                   /host="Cucurbita pepo"
FT                   /isolate="ZYMV-DF"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil:Distrito Federal"
FT                   /collection_date="Dec-2008"
FT                   /db_xref="taxon:12232"
FT   CDS             <1. .>837
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AFV41120.1"
FT                   /translation="SGTQPTVADAGATKKDKEDDKGKNKDVTGSGSGEKTVAAVTKDKD
FT                   VNAGSHGKIVPRLSKITKKMSLPRVKGNVILDIDHLLEYKPDQIELYNTRASHQQFASW
FT                   FNQVQTEYDLNEQQMGVVMNGFMVWCIENGTSPDINGVWVMMDGNEQVEYPLKPIVENA
FT                   KPTLRQIMHHFSDAAEAYIEMRNAEAPYMPRYGLLRNLRDRSLARYAFDFYEVTSKTPE
FT                   RAREAVAQMKAAALSNVSSRLFGLDGNVATTSEDTERHTARDVNRNMHTLLGVNTMQ"
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SQ   Sequence 837 BP; 270 A; 162 C; 210 G; 195 T; 0 other;

jx502667 Length: 837  28-OCT-2012  Type: N  Check: 6978  ..

       1  tcaggcactc agccaactgt ggcagacgct ggagctacaa agaaagacaa
      51  agaagatgac aaagggaaaa acaaggatgt aacaggctcc ggctcaggtg
     101  agaaaacggt agcagctgtc acgaaggata aggatgtgaa tgctggttcc
     151  catgggaaga ttgtgccgcg tctttcaaag atcacaaaga aaatgtcact
     201  gccacgcgtg aaaggaaatg tgatactcga tatcgatcat ttgctagaat
     251  ataagccgga tcaaattgag ttatataaca cacgagcgtc tcatcagcaa
     301  tttgcctctt ggttcaacca agttcaaaca gaatacgatc tgaatgagca
     351  acagatggga gttgtgatga atggtttcat ggtttggtgt attgaaaatg
     401  gcacctcacc cgacattaat ggagtgtggg ttatgatgga cggaaatgaa
     451  caagttgagt atcctttgaa accgatagtt gaaaatgcaa agccaacgct
     501  gcggcaaata atgcaccatt tttcagatgc agcagaggca tatatagaga
     551  tgagaaatgc agaggcacca tacatgccga ggtatggttt gcttcgaaac
     601  ctacgggata ggagcttagc acgatacgct ttcgatttct atgaagtcac
     651  ttctaaaact cctgaaagag cccgtgaagc tgttgcgcag atgaaagcag
     701  cagctcttag caatgtttct tcaaggttgt ttggccttga tggaaatgtt
     751  gccaccacta gcgaagacac tgaacggcac actgcacgtg atgttaatag
     801  aaacatgcac accttactag gtgtgaatac aatgcag