Sequence of DPV Zucchini yellow mosaic virus

Zucchini yellow mosaic virus isolate ZYMV-PA coat protein gene, partial cds.

ACC No: JX502669

Dated: 2012-10-28 | Length: 837 | CRC: -2070766908

                
ID   JX502669; SV 1; linear; genomic RNA; STD; VRL; 837 BP.
XX
AC   JX502669;
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DT   28-OCT-2012 (Rel. 114, Created)
DT   28-OCT-2012 (Rel. 114, Last updated, Version 1)
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DE   Zucchini yellow mosaic virus isolate ZYMV-PA coat protein gene, partial
DE   cds.
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KW   .
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OS   Zucchini yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-837
RA   Spadotti D.Sr.;
RT   "Biological, serological and molecular characterization of Brazilian
RT   isolates of Zucchini yellow mosaic virus";
RL   Unpublished.
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RN   [2]
RP   1-837
RA   Spadotti D.Sr.;
RT   ;
RL   Submitted (17-AUG-2012) to the INSDC.
RL   Fitopatologia, ESALQ, Avenida Padua Dias, 11, Piracicaba, SP 13418-900,
RL   Brazil
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CC   ##Assembly-Data-START##
CC   Assembly Method       :: Electropherogram quality analysis v.
CC                            06/01/2012
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1. .837
FT                   /organism="Zucchini yellow mosaic virus"
FT                   /host="Cucurbita pepo"
FT                   /isolate="ZYMV-PA"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil:Para"
FT                   /collection_date="Dec-2008"
FT                   /db_xref="taxon:12232"
FT   CDS             <1. .>837
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AFV41122.1"
FT                   /translation="SGTQPTVADAGATKKDKEDDKGKNKDVTGSGSGEKTVAAVTKDKD
FT                   VNAGSHGKIVPRLSKITKKMSLPRVKGNVILDIDHLLEYKPDQIELYNTRASHQQFASW
FT                   FNQVKTEYDLNEQQMGVVMNGFMVWCIENGTSPDINGVWVMMDGNEQVEYPLKPIVENA
FT                   KPTLRQIMHHFSDAAEAYIEMRNAEAPYMPRYGLLRNLRDRSLARYAFDFYEVNSKTPE
FT                   RAREAVAQMKAAALSNVSSRLFGLDGNVATTSEDTERHTARDVNRNMHTLLGVNTMQ"
XX
SQ   Sequence 837 BP; 267 A; 161 C; 217 G; 192 T; 0 other;

jx502669 Length: 837  28-OCT-2012  Type: N  Check: 7270  ..

       1  tcaggcactc agccaactgt ggcagacgct ggagccacaa agaaagacaa
      51  agaagatgac aaagggaaaa acaaggatgt tacaggctct ggttcaggtg
     101  agaaaacagt ggcagctgtc acgaaggaca aggatgtgaa tgctggttct
     151  catgggaaaa ttgtgccgcg tctttcgaag ataacaaaga aaatgtcact
     201  gccacgcgtg aaaggaaatg tgatactcga cattgatcac ttgctggagt
     251  ataagccgga tcaaattgag ttgtacaaca cacgagcgtc tcatcagcaa
     301  ttcgcctctt ggttcaatca agttaaaaca gaatatgatc tgaatgagca
     351  acagatggga gttgtaatga atggtttcat ggtttggtgc attgaaaatg
     401  gcacgtcacc cgacattaat ggagtatggg ttatgatgga cgggaatgag
     451  caggttgaat atcctttgaa accaatagtc gaaaatgcaa agccaacgct
     501  gcgacaaata atgcatcatt tttcagatgc agcggaggca tatatagaga
     551  tgagaaatgc agaggcacca tacatgccga ggtatggttt gcttcgaaac
     601  ttacgggata ggagtttggc acgatatgct ttcgactttt acgaagtcaa
     651  ttccaaaact ccggaaagag cccgcgaagc tgttgcgcag atgaaagcag
     701  cagccctcag caatgtttct tcaaggttgt tcggccttga tggaaatgtt
     751  gccaccacta gcgaagacac tgaacggcac actgcacgtg atgttaatag
     801  gaacatgcac accttgttag gtgtgaatac aatgcag