Sequence of DPV Zucchini yellow mosaic virus

Zucchini yellow mosaic virus isolate ZYMV-P coat protein gene, partial cds.

ACC No: JX502670

Dated: 2012-10-28 | Length: 837 | CRC: -1065537423

                
ID   JX502670; SV 1; linear; genomic RNA; STD; VRL; 837 BP.
XX
AC   JX502670;
XX
DT   28-OCT-2012 (Rel. 114, Created)
DT   28-OCT-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Zucchini yellow mosaic virus isolate ZYMV-P coat protein gene, partial cds.
XX
KW   .
XX
OS   Zucchini yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-837
RA   Spadotti D.Sr.;
RT   "Biological, serological and molecular characterization of Brazilian
RT   isolates of Zucchini yellow mosaic virus";
RL   Unpublished.
XX
RN   [2]
RP   1-837
RA   Spadotti D.Sr.;
RT   ;
RL   Submitted (17-AUG-2012) to the INSDC.
RL   Fitopatologia, ESALQ, Avenida Padua Dias, 11, Piracicaba, SP 13418-900,
RL   Brazil
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: Electropherogram quality analysis v.
CC                            06/01/2012
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .837
FT                   /organism="Zucchini yellow mosaic virus"
FT                   /host="Cucurbita pepo"
FT                   /isolate="ZYMV-P"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil:Sao Paulo"
FT                   /collection_date="Dec-2008"
FT                   /db_xref="taxon:12232"
FT   CDS             <1. .>837
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AFV41123.1"
FT                   /translation="SGIQPTVADAGATKKDKEDDKGKNKDVTGSGSGEKTVAAVTKDKD
FT                   VKAGSHGKIVPRLSKITKKMSLPRVKGNVILDIDHLLEYKPDQIELYNTRASHQQFASW
FT                   FNQVRTEYDLNEQQMGVMMNGFMVWCIENGTSPDINGVWVMMDGNEQVEYPLKPIVENA
FT                   KPTLRQIMHHFSDAAEAYIEMRNAEAPYMPRYGLLRNLRDRSLARYAFDFYEVTSKTPE
FT                   RAREAVAQMKAAALSNVSSRLFGLDGNVATTSEDTERHTARDVNRNMHTLLGVNTMQ"
XX
SQ   Sequence 837 BP; 275 A; 159 C; 207 G; 196 T; 0 other;

jx502670 Length: 837  28-OCT-2012  Type: N  Check: 6787  ..

       1  tcaggcattc agccaactgt ggcagacgct ggagctacaa agaaagacaa
      51  agaagatgac aaagggaaaa acaaggatgt aacaggctcc ggctcaggtg
     101  agaaaacagt agcagctgtc acgaaggata aggatgtaaa agctggttcc
     151  catggaaaga tcgtgccgcg tctttcaaag atcacaaaga aaatgtcact
     201  gccacgcgtg aaaggaaatg tgatacttga tatcgatcat ttgctagaat
     251  ataagccgga tcaaattgag ttatacaaca cacgagcgtc tcatcagcaa
     301  ttcgcatctt ggttcaacca agttcgaaca gaatacgatc tgaatgagca
     351  acagatggga gttatgatga atggtttcat ggtttggtgt attgaaaatg
     401  gcacctcacc cgacattaat ggagtgtggg ttatgatgga cggaaatgaa
     451  caagttgagt atcctttgaa accgatagtt gaaaatgcaa agccaacgct
     501  gcggcaaata atgcatcatt tttcagatgc agcagaggca tatatagaga
     551  tgagaaatgc agaggcacca tacatgccga ggtatggttt gcttcgaaac
     601  ctacgggata ggagtttagc acgatatgct ttcgatttct atgaagtcac
     651  ttctaaaact cctgaaagag cccgtgaagc tgttgcgcag atgaaagcag
     701  cagctcttag caatgtttct tcaaggttgt ttggccttga tggaaatgtt
     751  gccaccacta gcgaagacac tgaacggcac actgcacgtg atgttaatag
     801  aaacatgcac accttactag gtgtgaatac aatgcag