Sequence of DPV Groundnut bud necrosis virus

Groundnut bud necrosis virus isolate Chi_Knp nucleocapsid protein (NP) gene, complete cds.

ACC No: JX511963

Dated: 2012-10-28 | Length: 831 | CRC: 752783011

                
ID   JX511963; SV 1; linear; genomic RNA; STD; VRL; 831 BP.
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AC   JX511963;
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DT   28-OCT-2012 (Rel. 114, Created)
DT   28-OCT-2012 (Rel. 114, Last updated, Version 1)
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DE   Groundnut bud necrosis virus isolate Chi_Knp nucleocapsid protein (NP)
DE   gene, complete cds.
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KW   .
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OS   Groundnut bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-831
RA   Akram M.;
RT   "Sequence diversity of GBNV isolates associated with fabaceous and
RT   solanaceous crops";
RL   Unpublished.
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RN   [2]
RP   1-831
RA   Akram M.;
RT   ;
RL   Submitted (21-AUG-2012) to the INSDC.
RL   Division of Crop Protection, Indian Institute of Pulses Research,
RL   Kalyanpur, Kanpur, UP 208024, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .831
FT                   /organism="Groundnut bud necrosis virus"
FT                   /host="Capsicum annuum"
FT                   /isolate="Chi_Knp"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /collection_date="Sep-2009"
FT                   /note="serogroup: WSMoV IV"
FT                   /db_xref="taxon:198612"
FT   gene            1. .831
FT                   /gene="NP"
FT   CDS             1. .831
FT                   /codon_start=1
FT                   /gene="NP"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="AFV33967.1"
FT                   /translation="MSNVKQAPEKKIKELMAGGSADVEIETEDSTPGFSFKAFYDANKT
FT                   LEITFTNCLNIMKCRKQIFAACKSGKYVFCGKTIVATNTDVGPDDWTFNRTEAFIRTKM
FT                   ASMVEKSKNDAAKQEMYNKIMELPLVAAYGLNVPASFDTCALRMMLCIGGPLPLLSSMT
FT                   GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKNELEEMFKSAVKL
FT                   LSESNPGTASSISLKKYDEQVKYMDKAFSASLSMDDYGEHSKKKSSKAGPSLEL"
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SQ   Sequence 831 BP; 274 A; 147 C; 177 G; 233 T; 0 other;

jx511963 Length: 831  28-OCT-2012  Type: N  Check: 1643  ..

       1  atgtctaacg tcaagcaagc tcccgagaag aaaatcaaag aacttatggc
      51  tggtggctct gcagatgttg aaattgaaac agaagattcc actcccggat
     101  ttagctttaa agctttctat gacgctaaca aaactcttga aataactttc
     151  acaaactgtt tgaatattat gaagtgcagg aagcagatct ttgctgcttg
     201  taaaagtggt aagtatgttt tttgtggtaa aactattgtt gccacaaata
     251  ctgacgtagg gccagatgac tggaccttca ataggacaga agctttcatc
     301  aggaccaaaa tggctagtat ggttgaaaag agcaagaatg atgctgccaa
     351  gcaggagatg tacaataaaa taatggaatt accattagtg gcagcttatg
     401  gattaaatgt ccctgcatct ttcgatacat gtgctttaag gatgatgctc
     451  tgcattggag gtcctctgcc tcttttgtct agcatgacag gtctggcacc
     501  aattatattc cctctggctt attatcaaaa tgtgaagaaa gagaaattag
     551  gaattaagaa cttttctact tatgaacagg tttgcaaagt agccaaagta
     601  ctttctgctt cacagattga attcaaaaat gaactagagg aaatgtttaa
     651  atcagctgta aagctattga gtgagagcaa ccctggaaca gccagctcta
     701  tctcactcaa gaaatatgat gaacaagtca aatacatgga caaagccttc
     751  agtgccagtc tctcaatgga tgattatggt gaacattcta agaagaagag
     801  ttcaaaggct ggtccttcgc tggaattgta a