Sequence of DPV Groundnut bud necrosis virus

Groundnut bud necrosis virus isolate Soy_Pan nucleocapsid protein (NP) gene, complete cds.

ACC No: JX511966

Dated: 2012-10-28 | Length: 831 | CRC: 1675971248

                
ID   JX511966; SV 1; linear; genomic RNA; STD; VRL; 831 BP.
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AC   JX511966;
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DT   28-OCT-2012 (Rel. 114, Created)
DT   28-OCT-2012 (Rel. 114, Last updated, Version 1)
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DE   Groundnut bud necrosis virus isolate Soy_Pan nucleocapsid protein (NP)
DE   gene, complete cds.
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KW   .
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OS   Groundnut bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-831
RA   Akram M.;
RT   "Sequence diversity of GBNV isolates associated with fabaceous and
RT   solanaceous crops";
RL   Unpublished.
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RN   [2]
RP   1-831
RA   Akram M.;
RT   ;
RL   Submitted (21-AUG-2012) to the INSDC.
RL   Division of Crop Protection, Indian Institute of Pulses Research,
RL   Kalyanpur, Kanpur, UP 208024, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .831
FT                   /organism="Groundnut bud necrosis virus"
FT                   /host="Glycine max"
FT                   /isolate="Soy_Pan"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Pantnagar, Uttarakhand"
FT                   /isolation_source="leaves"
FT                   /collection_date="Sep-2010"
FT                   /note="serogroup: WSMoV IV"
FT                   /db_xref="taxon:198612"
FT   gene            1. .831
FT                   /gene="NP"
FT   CDS             1. .831
FT                   /codon_start=1
FT                   /gene="NP"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="AFV33970.1"
FT                   /translation="MSNVKQAPEKKIKELLAGGSADVEFETEDSTPGFSFKAFYDANKT
FT                   LEITITNCLNILKCRKQIFAACKSGKYVFCGKTIVATNTDVGPDDWTFKRTEAFIRTKM
FT                   ASMVEKSKNDAAKQEMYNKIMELPLVAAYGLNVPASFDTCALRMMLCIGGPLPLLSSMT
FT                   GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKNELEEMFKSAVKL
FT                   LSESNPGTASSISLKKYDEQVKYMDKAFSASLSMDDYGEHSKKKSSKAGPSLEL"
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SQ   Sequence 831 BP; 274 A; 147 C; 177 G; 233 T; 0 other;

jx511966 Length: 831  28-OCT-2012  Type: N  Check: 33  ..

       1  atgtctaacg tcaagcaagc tcccgagaag aaaatcaagg aacttttggc
      51  tggtggctct gcagatgttg aatttgaaac agaagattcc actcccggat
     101  ttagctttaa agctttctat gacgctaaca aaactcttga aataactatc
     151  acaaactgtt tgaatatttt gaagtgcagg aagcagatct ttgctgcttg
     201  caaaagtggt aagtatgtat tttgtggtaa aactattgtt gctacaaata
     251  ctgacgtagg gccagatgac tggaccttca aaaggacaga agctttcatc
     301  aggaccaaaa tggctagtat ggttgaaaag agcaagaatg atgctgctaa
     351  gcaagagatg tacaacaaaa taatggaatt accattagtg gcagcttatg
     401  gattaaatgt ccctgcatct ttcgatacat gtgctttaag gatgatgctc
     451  tgcattggag gtcctttgcc tctcttgtct agcatgacag gtctggcacc
     501  aattatattc cctctggctt attatcaaaa tgtgaagaaa gagaaattag
     551  gaattaagaa cttttctact tatgaacagg tttgcaaagt agccaaagta
     601  ctttctgctt cacagatcga attcaaaaat gaactagagg aaatgtttaa
     651  atcagctgta aagctattga gtgagagcaa ccctggaaca gccagctcta
     701  tctcactcaa gaaatatgat gaacaagtca aatacatgga caaagctttc
     751  agtgccagtc tctcaatgga tgattatggt gaacattcta agaagaagag
     801  ttcaaaggct ggtccttcgc tggaattgta a