Sequence of DPV Groundnut bud necrosis virus

Groundnut bud necrosis virus isolate Vr_Rai nucleocapsid protein (NP) gene, complete cds.

ACC No: JX524452

Dated: 2012-10-31 | Length: 831 | CRC: 859217345

                
ID   JX524452; SV 1; linear; genomic RNA; STD; VRL; 831 BP.
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AC   JX524452;
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DT   31-OCT-2012 (Rel. 114, Created)
DT   31-OCT-2012 (Rel. 114, Last updated, Version 1)
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DE   Groundnut bud necrosis virus isolate Vr_Rai nucleocapsid protein (NP) gene,
DE   complete cds.
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KW   .
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OS   Groundnut bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-831
RA   Akram M.;
RT   "Sequence diversity of GBNV isolates associated with fabaceous and
RT   solanaceous crops";
RL   Unpublished.
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RN   [2]
RP   1-831
RA   Akram M.;
RT   ;
RL   Submitted (24-AUG-2012) to the INSDC.
RL   Division of Crop Protection, Indian Institute of Pulses Research,
RL   Kalyanpur, Kanpur, UP 208024, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .831
FT                   /organism="Groundnut bud necrosis virus"
FT                   /segment="S-RNA"
FT                   /host="Vigna radiata (mungbean)"
FT                   /isolate="Vr_Rai"
FT                   /serotype="WSMoV serogroup IV"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Raipur, MP"
FT                   /isolation_source="leaves"
FT                   /collection_date="Mar-2011"
FT                   /db_xref="taxon:198612"
FT   gene            1. .831
FT                   /gene="NP"
FT   CDS             1. .831
FT                   /codon_start=1
FT                   /gene="NP"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="AFV48183.1"
FT                   /translation="MSNVKQAPEKKIKELLAGGSADVEIETEDSTPGFSFKAFYDANKT
FT                   LEITFTNCLNILKCRKQIFAACKSGKYVFCGKTIVATNTDVGPDDWTFKRTEAFIRTKM
FT                   ASMVEKSKNDAAKQEMYNKIMELPLVAAYGLNVPASFDTCALRMMLCIGGPLPLLSSMT
FT                   GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKNELEEMFKSAVKL
FT                   LSESNPGTASSISLKKYDEQVKYMDKAFSASLSMDDYGEHSKKKSSKAGPSLEL"
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SQ   Sequence 831 BP; 273 A; 147 C; 177 G; 234 T; 0 other;

jx524452 Length: 831  31-OCT-2012  Type: N  Check: 1287  ..

       1  atgtctaacg tcaagcaagc tcccgagaag aaaatcaagg aacttttggc
      51  tggtggctct gcagatgttg aaattgaaac agaagattcc actcccggat
     101  ttagctttaa agctttctat gacgctaaca aaactcttga aataactttc
     151  acaaactgtt tgaatatttt gaagtgcagg aagcagatct ttgctgcttg
     201  caaaagtggt aagtatgttt tttgtggtaa aactattgtt gctacaaata
     251  ctgacgtagg gccagatgac tggaccttca aaaggacaga agctttcatc
     301  aggaccaaaa tggctagtat ggttgaaaag agcaagaatg atgctgctaa
     351  gcaagagatg tacaacaaaa taatggaatt accattagtg gcagcttatg
     401  gattaaatgt ccctgcatct ttcgatacat gtgctttaag gatgatgctc
     451  tgcattggag gtcctttgcc tctcttgtct agcatgacag gtctggcacc
     501  aattatattc cctctggctt attatcaaaa tgtgaagaaa gagaaattag
     551  gaattaagaa cttttctact tatgaacagg tttgcaaagt agccaaagta
     601  ctttctgctt cacagatcga attcaaaaat gaactagagg aaatgtttaa
     651  atcagctgta aagctattga gtgagagcaa ccctggaaca gccagctcta
     701  tctcactcaa gaaatatgat gaacaagtca aatacatgga caaagctttc
     751  agtgccagtc tctcaatgga tgattatggt gaacattcta agaagaagag
     801  ttcaaaggct ggtccttcgc tggaattgta a