Sequence of DPV Groundnut bud necrosis virus

Groundnut bud necrosis virus isolate GBNV-[Tom_Rai] nonstructural movement protein (NSm) gene, complete cds.

ACC No: JX535596

Dated: 2012-11-05 | Length: 924 | CRC: -1110961947

                
ID   JX535596; SV 1; linear; genomic RNA; STD; VRL; 924 BP.
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AC   JX535596;
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DT   05-NOV-2012 (Rel. 114, Created)
DT   05-NOV-2012 (Rel. 114, Last updated, Version 1)
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DE   Groundnut bud necrosis virus isolate GBNV-[Tom_Rai] nonstructural movement
DE   protein (NSm) gene, complete cds.
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KW   .
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OS   Groundnut bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-924
RA   Akram M.;
RT   "Sequence diversity of GBNV isolates associated with fabaceous and
RT   solanaceous crops";
RL   Unpublished.
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RN   [2]
RP   1-924
RA   Akram M.;
RT   ;
RL   Submitted (28-AUG-2012) to the INSDC.
RL   Division of Crop Protection, Indian Institute of Pulses Research,
RL   Kalyanpur, Kanpur, UP 208024, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .924
FT                   /organism="Groundnut bud necrosis virus"
FT                   /segment="M"
FT                   /host="Lycopersicon esculentum"
FT                   /isolate="GBNV-[Tom_Rai]"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Raipur, MP"
FT                   /isolation_source="fruits"
FT                   /collection_date="Mar-2011"
FT                   /note="serogroup: IV"
FT                   /db_xref="taxon:198612"
FT   gene            1. .924
FT                   /gene="NSm"
FT   CDS             1. .924
FT                   /codon_start=1
FT                   /gene="NSm"
FT                   /product="nonstructural movement protein"
FT                   /protein_id="AFV66751.1"
FT                   /translation="MSRLSNVLESFRPSNSSNKELVPAVKKENNRSILARNVSKKDVDS
FT                   AIMNKAKTLNGKQYVSSGDSSVLGTYSSESAVEATSDDILSRLVVEQSTHLSNWKNDSL
FT                   VGNGNDKVSFTISIMPTWNSNRKYMHISRLIIWVVPTIPDSKNNVKASLIDPNKMTKEE
FT                   KIIISRQASLKDPMCFIFHLNWSFPKERNTPKQCMQLNLTSDEKYAKGVSFASVMYSWV
FT                   KNFCDTPIAAENNTCDVVPINRAKVIQSAALIEACKLMIPKGTGGKQISNQIKSLQKAA
FT                   ERLALEAENDDESLDVDIEMDNLLEI"
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SQ   Sequence 924 BP; 327 A; 167 C; 183 G; 247 T; 0 other;

jx535596 Length: 924  05-NOV-2012  Type: N  Check: 4742  ..

       1  atgtctcgct tgtctaacgt cttagaatct ttccgtcctt caaacagctc
      51  aaacaaagag ctagtgcctg cagttaaaaa ggaaaacaac agaagcattt
     101  tggcaagaaa tgtttccaaa aaagatgttg acagtgctat catgaacaaa
     151  gcaaaaacat tgaatgggaa acagtatgtt tctagtggag attctagcgt
     201  actgggcaca tactctagtg agtcagctgt ggaagctact tctgatgata
     251  ttctgtctag gcttgttgtt gagcaaagta ctcatctgag taactggaaa
     301  aatgattcac tcgtaggcaa tggaaatgac aaagttagct tcaccataag
     351  cataatgcct acatggaaca gtaacaggaa gtatatgcat atatcaaggc
     401  ttataatctg ggttgtgcca actatccctg attcaaaaaa caatgttaaa
     451  gcctccttaa ttgatccaaa caaaatgact aaagaggaga agataattat
     501  cagcagacaa gcttcattaa aagatcctat gtgttttatt ttccacctaa
     551  attggtcatt cccaaaagag agaaatactc caaaacaatg catgcagctc
     601  aacttaacca gtgatgaaaa atatgccaaa ggagttagct ttgcttcagt
     651  catgtattca tgggttaaga acttctgcga tacccctata gctgctgaaa
     701  ataacacatg tgatgtagtt cccattaaca gagccaaggt cattcaatct
     751  gctgccctaa ttgaagcatg caaattaatg atacctaaag gaactggtgg
     801  gaaacagata tccaatcaaa tcaagagtct gcagaaagct gctgaaaggc
     851  tggcattaga agctgaaaat gatgatgaga gcttagatgt cgatattgag
     901  atggataatc ttcttgaaat ataa