Sequence of DPV Chilli leaf curl Multan alphasatellite
Sunflower leaf curl Karnataka alphasatellite, complete sequence.
ACC No: JX569789
Dated: 2012-11-14 | Length: 1350 | CRC: -595758295
ID JX569789; SV 1; circular; genomic DNA; STD; VRL; 1350 BP.
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AC JX569789;
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DT 14-NOV-2012 (Rel. 114, Created)
DT 14-NOV-2012 (Rel. 114, Last updated, Version 1)
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DE Sunflower leaf curl Karnataka alphasatellite, complete sequence.
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KW .
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OS Sunflower leaf curl Karnataka alphasatellite
OC Viruses; Satellites; Satellite Nucleic Acids;
OC Single stranded DNA satellites; Begomovirus-associated alphasatellites;
OC unclassified Begomovirus-associated alphasatellites.
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RN [1]
RP 1-1350
RA Vanitha L.S., Govardhana M., Wickramaarachchi W.A.R.T., Rangaswamy K.T.,
RA Shankarappa K.S., Govindappa M.R.;
RT "Complete nucleotide sequence of alpha satellite molecule of Sunflower leaf
RT curl virus Karnataka";
RL Unpublished.
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RN [2]
RP 1-1350
RA Vanitha L.S., Govardhana M., Wickramaarachchi W.A.R.T., Rangaswamy K.T.,
RA Shankarappa K.S., Govindappa M.R.;
RT ;
RL Submitted (03-SEP-2012) to the INSDC.
RL GKVK, Department of Plant Pathology, University of Agricultural Sciences,
RL Bengaluru, Karnataka 560065, India
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FH Key Location/Qualifiers
FH
FT source 1. .1350
FT /organism="Sunflower leaf curl Karnataka alphasatellite"
FT /lab_host="tomato"
FT /isolate="Karnataka"
FT /mol_type="genomic DNA"
FT /country="India"
FT /isolation_source="leaf"
FT /collected_by="Vanitha L.S."
FT /collection_date="06-Apr-2011"
FT /db_xref="taxon:1250303"
FT gene 1. .1350
FT /gene="rep"
FT CDS 65. .1012
FT /codon_start=1
FT /gene="rep"
FT /product="replicase protein"
FT /protein_id="AFW19997.1"
FT /translation="MAAIKSAWWCFTLYFLTATAPNLAVLFENTHVSYSCWQEEECPTS
FT KRRHLQGYLQLKGQRTLNQVKSLFGEYKPHLEKQRARQTDDARDYCMKDETRVSGPFEF
FT GEYCPSGSHKRRQRELVIRSPVRMSEENPSVFRRVKAKLAEEEFQKSAPEIQIRNLKSW
FT QLRLKTLLGRDPDDRTIFWVYGPDGGEGKSTFARDLYRSGSWFYTRGGSADNVAYQYIG
FT CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLVNCIHVVVMSNFLPDF
FT EKISSDRVHVVPCIPCGVCRKHHIGDIKCDEYLD"
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SQ Sequence 1350 BP; 394 A; 242 C; 323 G; 391 T; 0 other;
jx569789 Length: 1350 14-NOV-2012 Type: N Check: 1640 ..
1 accccgcctg gagaccccga gctagagacc cccgtgcgat aagcgtgcct
51 ctctaaataa gtatatggct gcaattaaat ctgcctggtg gtgttttacg
101 ctctattttc tgactgcgac tgcaccaaat cttgctgtgt tgttcgagaa
151 cacacacgtt agttactctt gttggcagga agaggagtgc ccgacgagca
201 agcgtcgcca tctgcagggt tacctgcaat tgaagggtca gagaactctg
251 aaccaggtta aatcgttgtt cggtgagtac aaaccccatc tggagaaaca
301 acgtgcacgt cagaccgatg atgcacgcga ttactgtatg aaggatgaaa
351 ctagggtttc tggtcccttt gaatttgggg aatattgccc tagtggttct
401 cacaaacgca gacaacggga acttgtaatt agaagtccgg taaggatgtc
451 tgaggaaaat ccgtcagtat tccggcgagt taaggccaag ctggctgaag
501 aggaattcca gaagtccgcg cctgaaattc aaattcgaaa tttgaaatct
551 tggcaattgc gcctaaagac gctccttggg agggacccag atgaccgcac
601 tatcttctgg gtgtatggcc ctgatggtgg ggaaggaaaa tccacctttg
651 ccagagacct gtatagaagt gggtcctggt tctatacacg tggaggatct
701 gcagataatg tagcttacca gtacataggt tgtttaggaa ataatattgt
751 atttgatatt cctcgtgata agaaggatta tctgcaatat agtttaattg
801 aaatgtttaa ggatagatta atagttagta ataagtatga gcctttaatg
851 gctccgctag ttaattgtat tcatgtagta gttatgtcta attttctccc
901 tgattttgag aagattagca gtgatagagt tcatgtagtc ccttgtattc
951 cctgtggtgt ttgtcgtaaa caccacattg gtgatataaa atgtgatgag
1001 tatttggatt aatccctttt tacctttaat aaataaataa tactcactaa
1051 caataatatg aatttgagaa aacccaggcc gcgcagcggc aacacttaaa
1101 atattttgct tcttgaaaac aagaaggaat gatatgaaag aggaaacctg
1151 ttgcaatgtt aatgtgggac ccacattaag ataaatagaa aagaaaaaga
1201 atatatgtat tgggcttaaa atttaattgg gctttgaccg gtcaggataa
1251 gttggggtca ttttgtaaat agtaagttct ttaggggtgc gcttgcaatt
1301 attgaggtcc cttggctata aatataaatc ctccaggcgg gtgtagtatt