Sequence of DPV Ageratum yellow vein India alphasatellite
Tomato leaf curl Karnataka alphasatellite, complete genome.
ACC No: JX570736
Dated: 2012-11-19 | Length: 1389 | CRC: -539214714
ID JX570736; SV 1; circular; genomic DNA; STD; VRL; 1389 BP.
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AC JX570736;
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DT 12-NOV-2012 (Rel. 114, Created)
DT 19-NOV-2012 (Rel. 114, Last updated, Version 2)
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DE Tomato leaf curl Karnataka alphasatellite, complete genome.
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KW .
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OS Tomato leaf curl Karnataka alphasatellite
OC Viruses; Satellites; Satellite Nucleic Acids;
OC Single stranded DNA satellites; Begomovirus-associated alphasatellites;
OC unclassified Begomovirus-associated alphasatellites.
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RN [1]
RP 1-1389
RA RaJ S.K., Snehi S.K., Srivastava A.;
RT "Molecular identification of Tomato leaf curl Karnataka virus associated
RT with leaf curl disease of Parthenium hysterophorus in India";
RL Unpublished.
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RN [2]
RP 1-1389
RA RaJ S.K., Snehi S.K., Srivastava A.;
RT ;
RL Submitted (04-SEP-2012) to the INSDC.
RL Plant Molecular Virology, CSIR-National Botanical Research Institute,
RL Lucknow-226001, Rana Pratap Marg, Lucknow, U. P. 226001, India
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FH Key Location/Qualifiers
FH
FT source 1. .1389
FT /organism="Tomato leaf curl Karnataka alphasatellite"
FT /host="Parthenium hysterophorus L."
FT /isolate="NBRI"
FT /mol_type="genomic DNA"
FT /country="India:Lucknow"
FT /collected_by="Sunil Kumar Snehi"
FT /collection_date="Aug-2012"
FT /db_xref="taxon:1260770"
FT gene 79. .1026
FT /gene="Rep"
FT CDS 79. .1026
FT /codon_start=1
FT /gene="Rep"
FT /product="replication associated protein"
FT /protein_id="AFV99519.1"
FT /translation="MPTIQSQWWCFTVFFLSATAPDLVPLFENTHVSYACWQEEESPTT
FT RRRHLQGYLQLKGKRSLAQVKALFGDLNPHLEKQRARKTDDARDYCMKEETRVSGPFEF
FT GEYCPAGSHKRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEEFQKSAFEIQISNLKSW
FT QLRLKTLLDRDPDDRTIIWVYGPTGGEGKSTFARDLYRSGSWFYTRGGSADNVSYQYIG
FT CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDF
FT EKISSDRVHVIPCIPCGVCLKHHIHEIKCDEYLD"
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SQ Sequence 1389 BP; 417 A; 257 C; 318 G; 397 T; 0 other;
jx570736 Length: 1389 19-NOV-2012 Type: N Check: 5062 ..
1 acccagcctc ggttccctct ccttggatcc ctcgtgcgaa tcacgtgctc
51 tctctcttct gtatccttaa tcgaagaaat gcctactatc cagtcacaat
101 ggtggtgttt tactgtcttc ttcctttctg cgactgctcc cgacttggtt
151 cccctcttcg agaacacaca cgttagttac gcctgctggc aagaggaaga
201 gtctcccacg actcgacgac gccacttgca ggggtatctc cagttgaagg
251 gaaaaagaag ccttgcgcag gtgaaggcac tcttcggaga cctcaaccct
301 cacttggaga aacagcgagc tcgtaagacc gacgatgctc gcgattactg
351 tatgaaagag gaaactaggg tttccggccc ctttgaattt ggggaatatt
401 gtcctgctgg ttctcataaa cgccgacaaa gggaaagtgt aattcgatct
451 ccggtgagaa tggcagagga aaatccgtcc gtcttccgac gagtaaaggc
501 gaagattgca gaggaagaat tccagaagag cgcctttgag attcaaattt
551 caaatttgaa atcttggcaa ttgcgcctga agacgcttct cgatagggac
601 ccagatgacc gcactattat ctgggtatat ggacccactg gtggggaagg
651 aaaatccacc tttgccaggg acctgtacag aagtgggtca tggttctata
701 cacgtggtgg ttctgcagat aatgttagct accagtacat aggatgttta
751 ggaaataata ttgtatttga tatccctcgt gataagaagg attatctgca
801 atatagttta atagagatgt ttaaggatag gttaatagtt agtaataagt
851 acgagcctct tatggctccg ttaattaatt gtattcatgt tgtagttatg
901 tctaattttc tccctgattt tgagaagatt agtagtgata gggttcatgt
951 aattccttgt attccttgtg gtgtttgtct taaacatcat attcatgaaa
1001 taaaatgtga tgagtatttg gattaatttt gtttctttaa aaaaagaaag
1051 aatgaaatga aaaaaaaaag aaatattgaa tcatattgcc atattcttga
1101 gaagaatcag gccccgcagg ggcatctgat actaatattt tgttttttta
1151 aaaaagaaag aatgaaatga aaaaaaaatg aatataaaaa aaattaaaaa
1201 acttagggtt tataatgtgg gccatactaa gtgcgctaga gagagataaa
1251 atgcaaatgg gtactgtagc aacacggagg gactaaagtt gtaattattg
1301 aaagtttaag ggctccgcct gtaattattg agctaggcct cccgggatcc
1351 taggatataa atacacgtca ccgaggctgg tatagtatt