Sequence of DPV Iris yellow spot virus

Iris yellow spot virus isolate 1 nucleocapsid protein (NP) gene, complete cds.

ACC No: KC122192

Dated: 2013-02-03 | Length: 822 | CRC: 1289396311

                
ID   KC122192; SV 1; linear; genomic RNA; STD; VRL; 822 BP.
XX
AC   KC122192;
XX
DT   03-FEB-2013 (Rel. 115, Created)
DT   03-FEB-2013 (Rel. 115, Last updated, Version 1)
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DE   Iris yellow spot virus isolate 1 nucleocapsid protein (NP) gene, complete
DE   cds.
XX
KW   .
XX
OS   Iris yellow spot virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-822
RA   Abdelkhalek A.A., Hafez E.E.;
RT   "Molecular studies on IYSV in onion";
RL   Unpublished.
XX
RN   [2]
RP   1-822
RA   Abdelkhalek A.A., Hafez E.E.;
RT   ;
RL   Submitted (03-NOV-2012) to the INSDC.
RL   Molecular Plant Pathology, City of Scientific Research and Technological
RL   Applications, New Borg Alarab, Alexanderia, Egypt
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1. .822
FT                   /organism="Iris yellow spot virus"
FT                   /host="onion"
FT                   /isolate="1"
FT                   /mol_type="genomic RNA"
FT                   /country="Egypt"
FT                   /collection_date="2012"
FT                   /db_xref="taxon:60456"
FT   gene            1. .822
FT                   /gene="NP"
FT   CDS             1. .822
FT                   /codon_start=1
FT                   /gene="NP"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="AGD80103.1"
FT                   /translation="MSTVRVKPSEIEKLLSGGDVDVVIESDETEGFNFKNFVLANEGVQ
FT                   MSFNNGYTILRNRAGIYKTIKSGKFTFQGKTIVIPSACVMPNQDDWTFRRLEGFIRARM
FT                   LVELFETFFEKDKQKMYEKICGLPLVCGNGFKPSSNFRLTFHRLMSTLSGKKHSLAAGF
FT                   STLAAALQSCKESWVAKEALGISRFSTYEQLCKVARVMAAKEFKFTEKYKKVFDETVKI
FT                   LADCTPGTSGAASLIKFNEQIKILEGAFGKIVEDIGESSKPKNPSKKDRYN"
XX
SQ   Sequence 822 BP; 266 A; 147 C; 185 G; 224 T; 0 other;

kc122192 Length: 822  03-FEB-2013  Type: N  Check: 3096  ..

       1  atgtctaccg ttagggtgaa accgtcagaa atcgagaaac ttctgtctgg
      51  cggagatgtg gatgtggtta ttgaatcgga tgagactgaa ggattcaatt
     101  tcaagaattt tgtgttggca aacgaaggtg tccaaatgtc attcaacaat
     151  ggctacacaa ttcttagaaa cagagcaggc atttacaaga caattaaatc
     201  agggaaattc acattccaag gaaagaccat tgttattcct agtgcttgtg
     251  ttatgcccaa tcaagacgat tggacattca ggaggttgga aggcttcatc
     301  agagccagaa tgctcgtaga actgtttgaa acattttttg aaaaagataa
     351  gcagaaaatg tatgaaaaga tttgcgggct tcctctggtg tgcggcaatg
     401  gttttaagcc tagttccaac tttcggctga ctttccatag gcttatgtcc
     451  acactatcag gtaagaagca ctcgctagca gcaggattct caactttagc
     501  agcagctctt caaagttgca aggagtcatg ggtagccaaa gaagcactcg
     551  gtataagcag attctcaact tatgagcaac tctgtaaagt tgcaagagtc
     601  atggcagcaa aggaattcaa attcacagag aaatacaaaa aggtttttga
     651  tgaaactgta aagattcttg ctgactgcac tcctggaact tcgggtgctg
     701  cttcattgat caaattcaat gaacagatta aaattcttga aggtgctttt
     751  ggaaagattg ttgaagacat tggtgagtct tctaaaccca aaaatccctc
     801  taagaaagac agatataact ag