Sequence of DPV Sweet potato chlorotic fleck virus

Sweet potato chlorotic fleck virus isolate G-Sichuan-10-60 coat protein gene, complete cds.

ACC No: KC130183

Dated: 2013-02-03 | Length: 1109 | CRC: 261507499

                
ID   KC130183; SV 1; linear; genomic RNA; STD; VRL; 1109 BP.
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AC   KC130183;
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DT   03-FEB-2013 (Rel. 115, Created)
DT   03-FEB-2013 (Rel. 115, Last updated, Version 1)
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DE   Sweet potato chlorotic fleck virus isolate G-Sichuan-10-60 coat protein
DE   gene, complete cds.
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KW   .
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OS   Sweet potato chlorotic fleck virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Betaflexiviridae; Carlavirus.
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RN   [1]
RP   1-1109
RA   Qiao Q., Zhang Z.C., Qin Y.H., Zhang D.S., Tian Y.T., Wang S., Wang Y.J.;
RT   "Molecular variability of coat protein gene of Sweet potato chlorotic fleck
RT   virus and preparation of antiserum";
RL   Unpublished.
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RN   [2]
RP   1-1109
RA   Qiao Q., Zhang Z.C., Qin Y.H., Zhang D.S., Tian Y.T., Wang S., Wang Y.J.;
RT   ;
RL   Submitted (03-NOV-2012) to the INSDC.
RL   Institute of Plant Protection, Henan Academy of Agricultural Sciences,
RL   Huayuan Road 116, Zhengzhou, Henan 450002, China
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1109
FT                   /organism="Sweet potato chlorotic fleck virus"
FT                   /host="sweet potato"
FT                   /isolate="G-Sichuan-10-60"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="09-Sep-2010"
FT                   /db_xref="taxon:263004"
FT   CDS             131. .1030
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AGD79975.1"
FT                   /translation="MAAKEVNAMEKGGSSEGKEKVEGQTEALAGFKEVKAAQGEISDQQ
FT                   LMRHDALIKWYMENYRPSDVVNPLMQSGEKHVTLSDNLKEDAANIYSRPNFNTLLKWNR
FT                   EPVSQSIATAEDIAQIEAMLVGLGIPQERVRTAILDIVLYAAHSSSSPQQLYEGDVDFR
FT                   DANFKEAISRSSVAAVIKDKSTIRKVCRLFAPVVWSYMIINNEPPSGWQAKGFPENARF
FT                   AAFDTFDFVTNHAAIKPLEGIARPPNSVEYIAAQTSKRILIDKARRNEKLSNYEASVTG
FT                   GQQACEIKTELKGNGKCK"
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SQ   Sequence 1109 BP; 343 A; 228 C; 282 G; 256 T; 0 other;

kc130183 Length: 1109  03-FEB-2013  Type: N  Check: 5884  ..

       1  gaagagtagc tctgaagtaa aggcactgct tgacttcgaa gttgaagagg
      51  ataagaaaag atttgcttat aaggagtcta ccaaatccag cacaccccaa
     101  gttagtcaaa gccgcatact tgggacacct atggcagcga aggaggttaa
     151  tgcaatggaa aaagggggat caagcgaagg caaggagaaa gtggaagggc
     201  aaactgaagc acttgctggg ttcaaggaag taaaggccgc tcagggcgag
     251  atatctgacc aacaattaat gaggcacgat gcactgatta agtggtacat
     301  ggaaaactac agaccttctg atgtagtaaa tccactcatg caaagtggcg
     351  agaagcacgt gacactcagt gataatttga aggaggatgc tgccaacata
     401  tacagcaggc ccaactttaa cacactccta aaatggaaca gggagcctgt
     451  gagtcaaagc atcgcaacag ctgaagatat agcccaaatt gaagcaatgc
     501  ttgttggttt aggcataccg caggaaaggg tgaggacagc cattctggat
     551  attgtcctct atgctgcgca ttcaagctcc tcccctcaac agctgtatga
     601  gggtgatgtt gactttcgag acgcgaactt caaagaggcc atatccagat
     651  cctctgtggc cgcagtaatt aaggacaaat ccactattcg aaaagtttgc
     701  cgtctttttg caccagtggt ttggagctac atgataatca acaatgagcc
     751  cccgtcaggg tggcaggcca aaggtttccc agaaaatgct aggtttgctg
     801  cttttgacac ttttgatttc gtgacaaacc atgctgctat taaaccactt
     851  gagggcatag ctaggccccc aaattcagtg gaatatatag ctgctcaaac
     901  aagcaagagg atccttattg acaaagctcg caggaatgag aagcttagca
     951  attatgaggc aagtgtaact ggtgggcagc aagcatgcga aatcaagaca
    1001  gaactcaaag gtaatgggaa gtgcaagtga aagacctcca aatttcgttg
    1051  caacctttct ttatggtcgc ggactgctgt gtgattggga ctgttgtctt
    1101  gtgatttct