Sequence of DPV Papaya ringspot virus

Papaya ringspot virus P isolate MP coat protein gene, partial cds.

ACC No: KC149501

Dated: 2013-02-12 | Length: 858 | CRC: -35134395

                
ID   KC149501; SV 1; linear; genomic RNA; STD; VRL; 858 BP.
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AC   KC149501;
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DT   12-FEB-2013 (Rel. 115, Created)
DT   12-FEB-2013 (Rel. 115, Last updated, Version 1)
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DE   Papaya ringspot virus P isolate MP coat protein gene, partial cds.
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KW   .
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OS   Papaya ringspot virus P
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-858
RA   Basavaraj Y.B., Prachi S., Reetika K., Jain R.K.;
RT   "Studies on genetic diversity of PRSV-P and -W populations from different
RT   hosts and locations in India";
RL   Unpublished.
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RN   [2]
RP   1-858
RA   Basavaraj Y.B., Prachi S., Reetika K., Jain R.K.;
RT   ;
RL   Submitted (08-NOV-2012) to the INSDC.
RL   Division of Plant Pathology, Advanced Centre for Plant Virology, Indian
RL   Agricultural Research Institute, Pusa Campus, New Delhi, Delhi 110012,
RL   India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .858
FT                   /organism="Papaya ringspot virus P"
FT                   /host="Carica papaya"
FT                   /isolate="MP"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Madya Pradesh, Indore"
FT                   /isolation_source="leaf showing blistering and leaf
FT                   distortion symptoms"
FT                   /collected_by="Basavaraj YB"
FT                   /collection_date="25-Jun-2012"
FT                   /note="pathotype P"
FT                   /db_xref="taxon:12206"
FT   CDS             <1. .>858
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /protein_id="AGE32244.1"
FT                   /translation="SKTEAVDAGLNDKLKEKEKEKDKEREKEKKDKKDASDGGDVSTSI
FT                   KTGERDRDVNAGTGGTFTVPRIKAFTDKMILPRIKGKVVLNLNHLLQYNPQQIDISNTR
FT                   ATQSQFEKWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDMSGVWVMMDGETQVDY
FT                   PIKPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFEF
FT                   YEVNSKTPDRAREAHMQMKAAALRNTNRRMFGMDGSVSNKEENTERHTVEDVNRDMHSL
FT                   LGMRN"
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SQ   Sequence 858 BP; 300 A; 147 C; 216 G; 195 T; 0 other;

kc149501 Length: 858  12-FEB-2013  Type: N  Check: 8369  ..

       1  tccaagactg aagcagtgga tgcaggtctc aacgataagc tgaaggagaa
      51  ggaaaaagag aaagacaaag aaagagaaaa agaaaagaaa gacaagaagg
     101  atgctagtga cgggggtgat gtgtcaacta gcataaaaac tggagagaga
     151  gatagagatg tcaatgctgg aactggtgga acattcacag ttccaagaat
     201  caaggcattt actgataaaa tgattttgcc cagaattaaa ggaaaagttg
     251  tccttaattt gaatcatctt cttcagtata atccacagca gattgatatc
     301  tcaaacactc gtgccacaca atcacagttt gagaagtggt atgagggagt
     351  gaggaatgac tatggcctca atgataatga gatgcaagtg atgttaaatg
     401  gtttaatggt ttggtgtatc gaaaatggta catccccaga catgtctggt
     451  gtttgggtca tgatggatgg tgagactcag gtcgattatc caatcaaacc
     501  gttaattgaa catgcaactc cttcatttag gcaaatcatg gctcacttca
     551  gtaacgcggc agaagcatat attgcaaagc gaaatgcaac tgagaggtac
     601  atgccgcgat atggaatcaa gagaaatttg actgacatta gccttgctag
     651  atatgctttc gagttctatg aggtgaattc aaaaacacct gatagagctc
     701  gagaggctca tatgcagatg aaagcagctg ctctgcggaa cacaaaccgc
     751  agaatgtttg gaatggatgg cagcgtcagt aacaaggaag aaaacacgga
     801  gagacacaca gtggaagatg tcaacagaga catgcactct ctcctgggta
     851  tgcgcaac