Sequence of DPV Papaya ringspot virus

Papaya ringspot virus P isolate WB-1 nuclear inclusion protein A gene, partial cds.

ACC No: KC155250

Dated: 2013-02-12 | Length: 725 | CRC: 11669021

                
ID   KC155250; SV 1; linear; genomic RNA; STD; VRL; 725 BP.
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AC   KC155250;
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DT   12-FEB-2013 (Rel. 115, Created)
DT   12-FEB-2013 (Rel. 115, Last updated, Version 1)
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DE   Papaya ringspot virus P isolate WB-1 nuclear inclusion protein A gene,
DE   partial cds.
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KW   .
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OS   Papaya ringspot virus P
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-725
RA   Basavaraj Y.B., Jain R.K.;
RT   "Studies on genetic diversity of PRSV-P and -W populations from different
RT   hosts and locations in India";
RL   Unpublished.
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RN   [2]
RP   1-725
RA   Basavaraj Y.B., Jain R.K.;
RT   ;
RL   Submitted (11-NOV-2012) to the INSDC.
RL   Division of Plant Pathology, Advanced Centre for Plant Virology, Indian
RL   Agricultural Research Institute, Pusa Campus, New Delhi, Delhi 110012,
RL   India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .725
FT                   /organism="Papaya ringspot virus P"
FT                   /host="Carica papaya"
FT                   /isolate="WB-1"
FT                   /mol_type="genomic RNA"
FT                   /country="India:West Bengal"
FT                   /isolation_source="leaf showing shoe string symptom"
FT                   /collected_by="Jain RK"
FT                   /collection_date="25-Jul-2011"
FT                   /note="pathotype P"
FT                   /db_xref="taxon:12206"
FT   CDS             <1. .>725
FT                   /codon_start=1
FT                   /product="nuclear inclusion protein A"
FT                   /note="NIaPro"
FT                   /protein_id="AGE32254.1"
FT                   /translation="GKSLCQGMRNYNGIASVVCHLKNTSGRGKSLYGIGYNSFIITNRH
FT                   LFKENNGELIVKSQHGKFVVKNTTTLQIAPVGKTDLLIIRMPKDFPPFHSRARFRAMKA
FT                   GDKVCMIGVDYQENHIASKVSETSIISEGSGEFGCHWISTNDGDCGNPLVSVSDGFIVG
FT                   LHSLSTSTGDQNFFAKIPAQFEENVLRKIDNLTWSKHWSYNINELSWGALKVWESRPEA
FT                   IFNAQKEINQLNVFEQSGSR"
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SQ   Sequence 725 BP; 227 A; 131 C; 175 G; 192 T; 0 other;

kc155250 Length: 725  12-FEB-2013  Type: N  Check: 548  ..

       1  ggaaaaagtc tttgtcaagg tatgagaaat tacaatggta tagcttccgt
      51  ggtttgccat ttgaaaaaca catcaggacg tggaaagagc ttatatggaa
     101  tcgggtataa ttcattcatc atcacgaacc gacatttgtt caaggagaat
     151  aatggtgaac ttatagtgaa gtcccaacac gggaagttcg ttgtcaagaa
     201  caccacaacg ctccaaattg ctccagttgg aaagactgat cttttaatca
     251  ttcggatgcc aaaagatttt cctcctttcc atagcagagc taggtttagg
     301  gccatgaagg ctggggacaa ggtttgcatg ataggtgttg attaccaaga
     351  gaatcatatc gcgagtaaag tatcggaaac ttctatcatc agtgaaggct
     401  cgggggagtt tggatgtcac tggatatcca cgaatgacgg tgattgtggt
     451  aatccactag ttagtgtctc agatggtttc attgttggct tgcatagtct
     501  gtcaacatca actggagatc agaatttctt cgccaaaata cccgcacaat
     551  ttgaagaaaa tgtcttgagg aaaattgaca acttgacctg gagtaagcac
     601  tggagctaca acatcaatga actaagttgg ggagctctaa aagtgtggga
     651  gagtcggccc gaagcaattt ttaacgcgca gaaagaaatc aaccaattga
     701  atgttttcga acaaagcggt agtcg