Sequence of DPV Tomato leaf curl New Delhi virus

Tomato leaf curl New Delhi virus-[potato] isolate H-SM-20 coat protein (AV1) gene, complete cds.

ACC No: KC205213

Dated: 2013-03-04 | Length: 771 | CRC: -1728812278

                
ID   KC205213; SV 1; linear; genomic DNA; STD; VRL; 771 BP.
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AC   KC205213;
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DT   04-MAR-2013 (Rel. 116, Created)
DT   04-MAR-2013 (Rel. 116, Last updated, Version 1)
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DE   Tomato leaf curl New Delhi virus-[potato] isolate H-SM-20 coat protein
DE   (AV1) gene, complete cds.
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KW   .
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OS   Tomato leaf curl New Delhi virus-[potato]
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-771
RA   Jeevalatha A., Chakrabarti S.K., Singh B.P.;
RT   "Molecular diversity of begomovirus associated with apical leaf curl
RT   disease in potato";
RL   Unpublished.
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RN   [2]
RP   1-771
RA   Jeevalatha A., Chakrabarti S.K., Singh B.P.;
RT   ;
RL   Submitted (23-NOV-2012) to the INSDC.
RL   Division of Plant Protection, Central Potato Research Institute, Bemloe,
RL   Shimla, Himachal Pradesh 171001, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .771
FT                   /organism="Tomato leaf curl New Delhi virus-[potato]"
FT                   /host="potato"
FT                   /isolate="H-SM-20"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Haryana, Shamgarh"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:1296572"
FT   gene            1. .771
FT                   /gene="AV1"
FT   CDS             1. .771
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /protein_id="AGG20215.1"
FT                   /translation="MVKRPADIIFSTPVSKVRRRLNFDSPFGARAVVPIARVTKAKAWT
FT                   NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGSGLTHR
FT                   VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGSPQDFGEVFNMFDNEP
FT                   STATVKNMHRDRYQVLRKWHATVTGGTYASKEQALVRKFVRVNNYVVYNQQEAGKYENH
FT                   TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
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SQ   Sequence 771 BP; 224 A; 157 C; 188 G; 202 T; 0 other;

kc205213 Length: 771  04-MAR-2013  Type: N  Check: 4484  ..

       1  atggtgaagc gaccagcaga tatcatcttt tcaacgcccg tatcgaaagt
      51  acgccgtcgt ctcaacttcg acagcccctt tggagctcgt gcagttgtcc
     101  ccattgcccg cgtcacaaaa gcaaaggcct ggaccaacag gccgatgaac
     151  agaaaaccca gaatgtacag aatgtataga agtcccgacg tgccaagggg
     201  ctgtgaaggc ccttgtaagg tgcagtcctt tgaatctagg cacgatgtct
     251  ctcatattgg caaagtcatg tgtgttagtg atgttacccg aggatctgga
     301  ctcacacatc gcgtagggaa gcgattttgt gtgaaatctg tctatgtgct
     351  ggggaagata tggatggatg aaaacatcaa gacaaaaaac catactaaca
     401  gtgtcatgtt ttttttggtc cgtgaccgtc gtcctacagg atctccacaa
     451  gattttgggg aagtgtttaa catgtttgac aatgaaccga gcacagcaac
     501  ggtgaagaac atgcatcgtg atcgttatca agtcttacgg aagtggcatg
     551  ctactgtgac gggaggaaca tatgcatcta aggagcaagc attagttagg
     601  aagtttgtta gggttaataa ttatgttgtc tataaccaac aagaggccgg
     651  caagtatgag aatcatactg agaacgcatt aatgttgtat atggcctgta
     701  ctcatgcatc aaatcctgtg tatgctactt tgaaaatccg gatctatttc
     751  tatgattcgg taacaaatta a