Sequence of DPV Tomato yellow leaf curl virus

Tomato yellow leaf curl virus isolate KM-1 AV2 protein (AV2) gene, complete cds; and AV1 protein (AV1) gene, partial cds.

ACC No: KC207940

Dated: 2013-03-05 | Length: 540 | CRC: -972275584

                
ID   KC207940; SV 1; linear; genomic DNA; STD; VRL; 540 BP.
XX
AC   KC207940;
XX
DT   05-MAR-2013 (Rel. 116, Created)
DT   05-MAR-2013 (Rel. 116, Last updated, Version 1)
XX
DE   Tomato yellow leaf curl virus isolate KM-1 AV2 protein (AV2) gene, complete
DE   cds; and AV1 protein (AV1) gene, partial cds.
XX
KW   .
XX
OS   Tomato yellow leaf curl virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-540
RA   Wang X.G., Du Y.J., Huang J.F.;
RT   "Molecular characterization and pathogenicity of Tomato yellow leaf curl
RT   virus in China";
RL   Unpublished.
XX
RN   [2]
RP   1-540
RA   Wang X.G., Du Y.J., Huang J.F.;
RT   ;
RL   Submitted (27-NOV-2012) to the INSDC.
RL   College of Agriculture, Shi Hezi University, North Four Road, Shi Hezi, Xin
RL   Jiang 832000, China
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: DNAman v. DNAman5.0
CC   Sequencing Technology :: Complete Genomics
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .540
FT                   /organism="Tomato yellow leaf curl virus"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="KM-1"
FT                   /mol_type="genomic DNA"
FT                   /country="China:Xijiang Province"
FT                   /collected_by="X.G. Wang"
FT                   /collection_date="Aug-2012"
FT                   /db_xref="taxon:10832"
FT   gene            155. .505
FT                   /gene="AV2"
FT   CDS             155. .505
FT                   /codon_start=1
FT                   /gene="AV2"
FT                   /product="AV2 protein"
FT                   /protein_id="AGG35476.1"
FT                   /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRNL
FT                   ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV
FT                   PEAQNVQNVSKP"
FT   gene            315. .>540
FT                   /gene="AV1"
FT   CDS             315. .>540
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="AV1 protein"
FT                   /protein_id="AGG35477.1"
FT                   /translation="MSKRPGDIIISTPASKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW
FT                   TYRPMYRKPRMYRMYRSPDVPRGCADHAKS"
XX
SQ   Sequence 540 BP; 137 A; 136 C; 117 G; 150 T; 0 other;

kc207940 Length: 540  05-MAR-2013  Type: N  Check: 8540  ..

       1  taatattacc tgttggccgc gccttctctt tttatgtggt ccccacgagg
      51  gttccacata cgtcactgtc aaccaatcaa attgcatcct caaacgttag
     101  ataagtgttc atttgtcttt atatacttgg tccccaagta gtctgtcttg
     151  caatatgtgg gatccacttc taaacgaatt tcctgaatct gttcacggat
     201  ttcgttgtat gttagctatt aaatatttgc agtccgttga ggaaacttac
     251  gagcccaata cattgggcca cgatttaatt aggaatctta tatctgttgt
     301  aagggcccgt gactatgtcg aagcgaccag gcgatataat catttccacg
     351  cccgcctcga aggttcgccg aaggctgaac ttcgacagcc catacagcag
     401  ccgtgctgct gtccccattg tccaaggcac aaacaagcga cgatcatgga
     451  cgtacaggcc catgtaccgg aagcccagaa tgtacagaat gtatcgaagc
     501  cctgatgttc ctcgtggatg tgcggaccat gcaaagtcca