Sequence of DPV Tomato spotted wilt virus
Tomato spotted wilt virus strain YN-2 G1/G2 glycoprotein precursor, gene, complete cds.
ACC No: KC294569
Dated: 2013-03-18 | Length: 3408 | CRC: -1027421561
ID KC294569; SV 1; linear; genomic RNA; STD; VRL; 3408 BP.
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AC KC294569;
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DT 18-MAR-2013 (Rel. 116, Created)
DT 18-MAR-2013 (Rel. 116, Last updated, Version 1)
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DE Tomato spotted wilt virus strain YN-2 G1/G2 glycoprotein precursor, gene,
DE complete cds.
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KW .
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OS Tomato spotted wilt virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN [1]
RP 1-3408
RA Sun S.;
RT ;
RL Submitted (29-NOV-2012) to the INSDC.
RL Hunan Plant Protection Institute, Hunan Plant Protection Institute,
RL Mapoling, Furong District, Changsha, Hunan 410125, China
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CC ##Assembly-Data-START##
CC Sequencing Technology :: Sanger dideoxy sequencing
CC ##Assembly-Data-END##
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FH Key Location/Qualifiers
FH
FT source 1. .3408
FT /organism="Tomato spotted wilt virus"
FT /host="iris"
FT /strain="YN-2"
FT /mol_type="genomic RNA"
FT /country="China"
FT /collection_date="Jul-2012"
FT /db_xref="taxon:11613"
FT CDS 1. .3408
FT /codon_start=1
FT /product="G1/G2 glycoprotein precursor"
FT /protein_id="AGH12863.1"
FT /translation="MRILKLLELVVKVSLFTIALSSVLLAFLIFRATDAKVEIIRGDHP
FT EVYDDSAENEVPTAASIQRKAILETLTNLMLESQTPGTRQIREEESTIPIFAGSTTQKI
FT ISVSDLPNNCLNASSLKCEIKGISTYNVYYQVENNGVIYSCVSDSAEGLEKCDNSLNLP
FT KRFSKVPVIPITKLDNKRHFSVGTKFFISESLTQDNYPITYNSYPTNGTVSLQTVKLSG
FT DCKITKSNFANPYTVSITSPEKIMGYLIKKPGENAEHKVISFSGSASITFTEEMLDGEH
FT NLLCGDKSAKIPKTNKRVRDCIIKYSKSIYKQTACINFSWIRLILIALLIYFPIRWLVN
FT KTTKPLFLWYDLIGLITYPILLLINCLWKYFPFKCSNCGNLCIITHECTKICICNKSKA
FT SKEHSSECPILSKETDHDYNKHKWTSMEWFHLIVNTKLSFSLLKFVTEILIGLVILSQM
FT PMSMAQTTQCLSGCFYVPGCPVLVTSKFEKCPEKDQCYCNVKEDKIIESIFGTNIVIEG
FT PNDCIENQNCVAHPSIDNLIKCRLGCEYLDLFRNKPLYNGFSDYTGSSLGLTSVGLYEA
FT KRLRNGIIDSYNRTDKISGMIAGDSLDKNETSIPENILPRQSLIFDSVVDGKYRYMVEQ
FT SLLGGGGTVFMLNDKTSEKAKKFVIYIKSVGIHYEVSEKYTTAPIQSTHTDFYSTCTGN
FT CDTCRKNQALTGFQDFCITPTSYWGCEEAWCFAINEGATCGFCRNIYDMDKSYRIYSVL
FT KSTIVADVCISGILGGQCSRITEEVPYENALFQADIQADLHNDGITIGELIAHGPDSHI
FT YSGNIANLNDPVKMFGHPQLTHDGVPIFTKKTLEGDDMSWDCAAIGKRSITIKTCGYDT
FT YRFRSGLEQISDIPISFKDFSSFFLEKSFSLGKLKIVVDLPSDLFKVAPKRPSITSTRL
FT NCNGCLLCGQGLSCIMEFFSDLTFSTAISIDACSLSTYQLAVKKGSNKYNITMFCSANP
FT DKKKMTLYPEGNPDISVEVLVNNVIVEEPENIIDQNDEYAHEEQQYNSDSSAWGFWDYI
FT KSPFNFIASYFGSFFDTIRVILLIAFIFLLIYSFSILTTICKGYVKNKSYKSRSKIEDD
FT DGSEIKAPMLMKDTMTRRRPPMDFSHLV"
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SQ Sequence 3408 BP; 1125 A; 584 C; 625 G; 1074 T; 0 other;
kc294569 Length: 3408 18-MAR-2013 Type: N Check: 1843 ..
1 atgagaattt taaaactact agaactagtg gtaaaagtga gtcttttcac
51 aattgccctg agttctgtct tgttggcatt cttgatcttc agagccacag
101 atgccaaagt agaaataatt cgtggagatc atcctgaggt ttatgatgat
151 tctgctgaga atgaagtacc cactgctgca tcgattcaac gcaaggctat
201 cttggagact ttaactaatc taatgctaga atctcagact cctggaaccc
251 gtcagatacg agaagaagaa tcaaccatcc ctatttttgc tgggtcaact
301 acgcaaaaaa taatctctgt ctcggatctt cctaacaact gcttgaatgc
351 ttcttcatta aaatgtgaga taaaaggcat atccacttat aatgtttatt
401 atcaagtgga aaataatggt gtcatatatt cctgtgtttc tgattcagca
451 gaagggttag aaaaatgtga caattcttta aatttgccaa agagattctc
501 caaagtcccg gttattccca ttaccaaact tgacaacaaa aggcattttt
551 cagttggaac aaaattcttc atttcagaaa gcctgacaca agataattat
601 cctataactt ataactcgta ccctactaat ggaacagtat cattacaaac
651 cgtaaagtta tctggagact gcaaaataac taaatcaaac tttgccaatc
701 cctatactgt tagcatcact agccccgaga agatcatggg ttatttgata
751 aaaaaacctg gtgaaaatgc ggaacacaag gtcatatctt tttctggatc
801 agcaagcatc acttttactg aagaaatgtt ggatggtgag cacaatctct
851 tgtgcggtga caaatcagct aaaataccaa aaacaaacaa aagagttaga
901 gattgcataa tcaaatattc aaagagcatt tataagcaaa cagcctgcat
951 caatttctct tggataagat taatattgat agctttgttg atctatttcc
1001 ctatccggtg gttagtaaac aagacaacta aacctctctt tctctggtat
1051 gatcttatag gcttgatcac ataccctatt ttgttgctca taaattgctt
1101 atggaaatat tttccattca aatgttctaa ctgtggcaat ttgtgcataa
1151 tcacacatga gtgtactaaa atttgcatct gcaacaaaag caaagcctca
1201 aaagaacact cttcagagtg tcccatactg tccaaagaaa cagatcatga
1251 ctacaacaaa cataagtgga ctagcatgga atggttccat ctaatagtga
1301 acactaagct aagctttagt ttgctgaaat ttgtgactga aatcttaata
1351 ggtttggtca ttttgtctca aatgcccatg tctatggctc aaactactca
1401 atgtttgagt ggatgttttt atgttccagg ctgtccagtt ttggttacaa
1451 gcaaatttga aaaatgccct gaaaaagatc aatgttactg taatgtaaaa
1501 gaagataaga ttatagaaag tatctttggc actaacattg ttatagaagg
1551 tcctaatgat tgcatagaga accagaattg tgttgcacac ccatctattg
1601 ataatcttat aaaatgtaga ttaggttgcg aatacttaga tttatttcgc
1651 aacaaacctt tgtataatgg gttttcagat tatacaggaa gctctttggg
1701 gttaacatcg gttggtctgt atgaggctaa gagattgagg aatggtataa
1751 tagattccta taaccgtaca gacaagatct ctggaatgat tgcaggagat
1801 tctctagaca aaaatgaaac aagcatacca gagaacattc tgcctagaca
1851 atcattgatc tttgattctg ttgtggatgg gaaatataga tatatggtag
1901 aacaatctct tttaggagga ggagggactg tattcatgtt aaatgataag
1951 acctcagaaa aagcaaaaaa attcgtgatt tatatcaaaa gtgtgggaat
2001 tcattatgaa gtgtctgaaa aatacacaac agctcctatc caaagcactc
2051 acacagattt ttattccact tgtacaggaa actgtgacac ttgcagaaaa
2101 aatcaagctt taacaggttt ccaagatttt tgtataacac caacttctta
2151 ttggggatgt gaagaagctt ggtgttttgc aattaatgaa ggtgctacat
2201 gcgggttctg tcgaaatatt tatgacatgg ataaatcata tagaatttat
2251 tcagtgctaa aatcaactat agtggcagat gtttgcattt ctggtatttt
2301 aggaggtcaa tgctcaagga ttactgaaga ggttccttat gaaaatgcat
2351 tgtttcaagc tgatatacaa gcagatctgc acaatgatgg tatcactata
2401 ggtgaactga tagctcatgg acctgacagc catatttatt ctggaaatat
2451 tgcaaacttg aatgatcctg tcaaaatgtt tggtcatcca caattgactc
2501 atgatggagt gcccattttt actaagaaaa ctctagaagg agatgacatg
2551 tcttgggatt gtgcagcaat agggaaaaga tcaatcacta ttaaaacatg
2601 cggatatgac acatacagat ttagatctgg tttagagcaa atatcagata
2651 ttcccattag tttcaaagat ttctctagtt ttttcttgga aaaatctttt
2701 agtttaggga aactcaagat tgttgttgat cttccatctg atctttttaa
2751 agttgctcct aagagacctt ccataacttc gacaagattg aattgcaacg
2801 gctgtcttct atgcggtcaa ggtttatctt gcattatgga atttttctca
2851 gatttgacat tttctactgc aatttctata gatgcttgct ctctatctac
2901 ttatcagctg gctgttaaaa aagggtctaa caaatacaac ataacaatgt
2951 tttgttctgc taatccggat aagaagaaaa tgacattgta tccagaaggc
3001 aatccggata tttctgtgga agttctggtc aataatgtta ttgtagaaga
3051 accggagaac ataatagatc aaaatgatga gtatgctcat gaagaacaac
3101 aatataattc tgattcctca gcatggggct tctgggatta tattaaaagc
3151 ccattcaatt tcattgcaag ttactttggc tcattttttg atactatcag
3201 agtgatattg cttattgcat ttattttcct tttgatttat tccttttcta
3251 ttctaacaac aatttgtaaa ggatatgtca agaataaatc ttataaatct
3301 agatccaaga tagaggatga tgatggttct gagatcaaag cccctatgtt
3351 aatgaaagat acaatgacaa gacgaaggcc acctatggat ttctctcacc
3401 ttgtctga