Sequence of DPV Tomato spotted wilt virus

Tomato spotted wilt virus strain YN-2 nucleocapsid protein (N) gene, complete cds.

ACC No: KC294570

Dated: 2013-03-18 | Length: 777 | CRC: -1409107140

                
ID   KC294570; SV 1; linear; genomic RNA; STD; VRL; 777 BP.
XX
AC   KC294570;
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DT   18-MAR-2013 (Rel. 116, Created)
DT   18-MAR-2013 (Rel. 116, Last updated, Version 1)
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DE   Tomato spotted wilt virus strain YN-2 nucleocapsid protein (N) gene,
DE   complete cds.
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KW   .
XX
OS   Tomato spotted wilt virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-777
RA   Sun S., Zhang D., Liu Y., Zhu C.;
RT   ;
RL   Submitted (30-NOV-2012) to the INSDC.
RL   Hunan Plant Protection Institute, Hunan Plant Protection Institute,
RL   Mapoling, Furong District, Changsha, Hunan 410125, China
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1. .777
FT                   /organism="Tomato spotted wilt virus"
FT                   /host="iris"
FT                   /strain="YN-2"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Jul-2012"
FT                   /db_xref="taxon:11613"
FT   gene            1. .777
FT                   /gene="N"
FT   CDS             1. .777
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="AGH12864.1"
FT                   /translation="MFKVKLTKENIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI
FT                   KKMSIISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS
FT                   NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLTELA"
XX
SQ   Sequence 777 BP; 260 A; 130 C; 169 G; 218 T; 0 other;

kc294570 Length: 777  18-MAR-2013  Type: N  Check: 79  ..

       1  atgtttaagg ttaagctcac taaggaaaac attgttgctt tgttgacaca
      51  aggcaaagat cttgaatttg aagaagatca gaatctggta gcatttaact
     101  tcaagacttt ttgtctggaa aaccttgacc agatcaagaa gatgagcatt
     151  atttcatgtc tgacatttct gaagaatcgt cagagtataa tgaaggttat
     201  taagcaaagt gattttactt ttggcaaaat cactataaag aaaacttcag
     251  acaggattgg agccactgac atgaccttca gaaggcttga tagcttgatc
     301  agggtcaggc ttgtcgagga aactgggaat tctgagaatc tcaatactat
     351  caaatctaag attgcttctc accctctgat tcaagcctat ggattacctc
     401  ttgatgatgc aaagtctgtg aggcttgcca taatgctggg aggtagctta
     451  cctcttattg cttcagttga tagctttgag atgatcagtg ttgtcttggc
     501  tatatatcag gatgcaaaat acaaagacct cgggatcgat ccaaagaagt
     551  atgacaccag ggaagcctta ggaaaagttt gcactgtgct aaaaagcaaa
     601  gcatttgaaa tgaatgaaga tcaggtgaag aaagggaaag agtatgctgc
     651  tatacttagc tccagcaatc ctaatgctaa aggaagtatt gctatggaac
     701  attacagtga aactcttaac aagttctatg aaatgttcgg ggttaaaaaa
     751  caggcaaaac tcacagaact tgcttaa