Sequence of DPV Southern rice black-streaked dwarf virus

Southern rice black-streaked dwarf virus isolate Quang Tri P6 protein gene, complete cds.

ACC No: KC508115

Dated: 2013-05-05 | Length: 2382 | CRC: -548934306

                
ID   KC508115; SV 1; linear; genomic RNA; STD; VRL; 2382 BP.
XX
AC   KC508115;
XX
DT   05-MAY-2013 (Rel. 116, Created)
DT   05-MAY-2013 (Rel. 116, Last updated, Version 1)
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DE   Southern rice black-streaked dwarf virus isolate Quang Tri P6 protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Southern rice black-streaked dwarf virus
OC   Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Fijivirus;
OC   unclassified Fijivirus.
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RN   [1]
RP   1-2382
RA   Tran T.N., Ta A.H., Do V.N., Mishra N.S.;
RT   ;
RL   Submitted (20-JAN-2013) to the INSDC.
RL   Plant Moleculer Biology, International Centre Genetic Engineering and
RL   Biotechnology, Aruna Asaf Ali Marg, New delhi, Delhi 110067, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .2382
FT                   /organism="Southern rice black-streaked dwarf virus"
FT                   /segment="6"
FT                   /isolate="Quang Tri"
FT                   /mol_type="genomic RNA"
FT                   /country="Viet Nam"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:519497"
FT   CDS             1. .2382
FT                   /codon_start=1
FT                   /product="P6 protein"
FT                   /protein_id="AGK45010.1"
FT                   /translation="MSTNLTNIAMLKKRLQRRVTTNTSVNNEVENTPSQPLEPVANASS
FT                   SSESSVITKRYARPSNKISSSSTVAENSDDTKLLHNLISAAPNASVLMKPNTDVLNLSK
FT                   TQTILPSLVVNATCQLKLKDLNDWKGFVLCHPNSPQSSVSSTLYTGNKLFVVFQKKNVQ
FT                   NDDSEFKMMMKDKAFTFLDSNVFKPKSKEFMTSLYNASSNVIITDSELEFDDLSNLKIC
FT                   FSPSDIPSLTSLHKRMIKFSFWPSNILIPHLTEIANHFGTLKLAHFEDIELDSSNAESA
FT                   LFIVSNNKFSEQSENVLQFIDAQPNSQLLINKINDMNERFGSLANGTHFMIGTVPSKSE
FT                   LDDDKKKNLFGSNHVILMVNPVNILFDTTQLYFLLFSYLNKFVMQASIVQVFTTDLVNH
FT                   GDMFSVAFNVIKCFYDSISCTLINHVIEDEVDVQKRVLMTVNDLSDDIKEFIPPNATST
FT                   EDSETDNKRVENEIKALIKFDSQKQQTSTSKTLEVQEQQRSWADVVERTECDVEKTSSI
FT                   ALNDVIRNMTYEDFVTNAKLIEFARRYSDETGEAHKLKVEMTRLSEENGQLLNAIKHNE
FT                   ACIIQNNEEILNLREQSDRLTISLKQLDDAYSELVKEKDEVKTERDAFEAKLQEANKVI
FT                   VEKTTRLNEAIDELEKAEDRNSSVVEEEPDNTEHRNDGFSLFGECLDKVRLLKNKYPHL
FT                   YSGVDANFGDLTSLLRMLLIKIDSITSLCDANVTVSENQWSAYGLCSLTSSTHDNATTE
FT                   MLSVNQVGLMNFQVANFTNIVYDVFFYNMFIKFLWQLISE"
XX
SQ   Sequence 2382 BP; 770 A; 490 C; 420 G; 702 T; 0 other;

kc508115 Length: 2382  05-MAY-2013  Type: N  Check: 7945  ..

       1  atgtctacca acctcacgaa catagccatg ctgaaaaaac gattgcaaag
      51  acgagtcacc actaacacct ctgtcaacaa tgaagtcgag aacactccat
     101  cccaaccact cgaacctgtt gcgaacgctt cttcttcttc agaaagctcc
     151  gtcattacca aacgttacgc ccgtccatct aacaaaattt cttcttcatc
     201  tacagttgcc gagaattcag atgatacgaa actgctccac aacttgattt
     251  ccgcagcgcc gaatgcttct gtgcttatga aaccaaacac tgacgtactc
     301  aatctgtcca aaactcaaac tatccttcca tctttagtag tgaatgcaac
     351  ctgtcaactg aaattgaagg atttgaatga ttggaaaggt tttgtactgt
     401  gtcatccaaa ttctccccaa tctagcgttt cttccacttt gtataccgga
     451  aataaactgt ttgtcgtatt ccagaaaaag aacgttcaaa atgatgattc
     501  tgaatttaag atgatgatga aagataaagc tttcactttc cttgattcaa
     551  atgtttttaa accgaaatcg aaagaattca tgacttctct ttacaacgcg
     601  tcttcaaatg tgatcatcac cgactctgaa ttggaatttg atgatttgag
     651  caacttgaaa atctgttttt ccccttccga cattccaagt ttgacttctc
     701  ttcacaaaag aatgatcaaa tttagttttt ggccaagtaa cattttgatc
     751  cctcatctca ctgaaattgc caaccatttc ggaactttga aacttgcaca
     801  ttttgaagac attgaacttg actcttcaaa cgcggaatct gctctcttta
     851  tcgtatcaaa caacaagttt tctgaacaaa gtgagaacgt acttcaattt
     901  atcgatgctc aaccaaattc acaacttctg atcaacaaaa ttaatgacat
     951  gaacgaacgt tttggttcac tggcaaacgg cactcatttc atgattggaa
    1001  ctgtcccttc gaaatctgaa cttgacgatg ataagaaaaa gaacttgttt
    1051  ggatcaaatc acgtcatcct gatggtcaat cccgttaaca ttctttttga
    1101  cacaacccaa ttgtacttct tgctgttttc ttatctgaat aaatttgtaa
    1151  tgcaagcttc aattgttcaa gttttcacaa ctgacctggt caaccatggt
    1201  gatatgtttt cagtagcttt caatgttatc aaatgctttt acgattccat
    1251  cagttgcacc ctcattaatc acgtcattga agatgaagtt gacgttcaaa
    1301  aacgtgtgtt gatgacagtt aatgatttgt ctgatgacat taaagagttt
    1351  attcctccca acgccacatc tacggaagat tctgaaactg acaacaagcg
    1401  tgtagaaaac gaaattaagg cattgatcaa attcgactct caaaagcaac
    1451  aaacatcaac gtcaaaaaca ctagaagttc aagaacagca acgttcatgg
    1501  gccgacgtag ttgaaagaac agaatgcgat gtcgaaaaga cttcttccat
    1551  tgctcttaat gatgtgatca gaaacatgac atacgaagat tttgtcacga
    1601  atgctaagtt gatcgaattt gcaagacgat actctgatga aacaggcgaa
    1651  gctcacaaat tgaaagtcga aatgacacgc ttatcagaag aaaatggtca
    1701  acttttgaat gccatcaaac acaacgaagc ttgcatcatc caaaacaatg
    1751  aagaaatttt gaatttgaga gaacaaagtg atcgtttgac tatcagcttg
    1801  aaacaacttg acgacgctta ttctgaactg gtgaaagaga aagatgaagt
    1851  taaaactgaa agagatgcgt ttgaagcgaa attgcaagaa gcgaataaag
    1901  tgatcgttga gaagactact cggttgaacg aagcgattga tgagttggaa
    1951  aaagctgaag acagaaacag ttccgttgtc gaagaagaac ctgacaatac
    2001  tgaacatcgt aacgacggtt tctcgctttt tggtgaatgt ctcgataaag
    2051  tgcgtcttct caaaaacaaa tatcctcatc tttattctgg cgtagatgct
    2101  aactttggtg atctgacttc actattgcgt atgcttttga tcaagattga
    2151  tagtatcact tcactttgcg atgcgaacgt tactgtgtct gagaaccaat
    2201  ggagcgcgta tggattatgt agtttgactt catcaacgca tgacaatgcc
    2251  acaactgaaa tgctgtctgt aaatcaagtc ggtttaatga atttccaagt
    2301  tgcgaacttc accaacatcg tttatgacgt ctttttttac aacatgttca
    2351  ttaagttttt gtggcaactt atttcagagt aa