Sequence of DPV Cowpea aphid-borne mosaic virus

Cowpea aphid-borne mosaic virus isolate Fernao-SP coat protein mRNA, partial cds.

ACC No: KC777403

Dated: 2013-04-30 | Length: 828 | CRC: -1857267464

                
ID   KC777403; SV 1; linear; mRNA; STD; VRL; 828 BP.
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AC   KC777403;
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DT   30-APR-2013 (Rel. 116, Created)
DT   30-APR-2013 (Rel. 116, Last updated, Version 1)
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DE   Cowpea aphid-borne mosaic virus isolate Fernao-SP coat protein mRNA,
DE   partial cds.
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KW   .
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OS   Cowpea aphid-borne mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-828
RA   Rodrigues L.K., Silva L.A., Garcez R.M., Chaves A.L., Colariccio A.,
RA   Harakava R., Eiras M.;
RT   "Phylogenetic analysis of Cowpea aphid-borne mosaic virus passion-flower
RT   isolates from Brazil";
RL   Unpublished.
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RN   [2]
RP   1-828
RA   Rodrigues L.K., Silva L.A., Garcez R.M., Chaves A.L., Colariccio A.,
RA   Harakava R., Eiras M.;
RT   ;
RL   Submitted (12-MAR-2013) to the INSDC.
RL   Laboratory of Plant Virology, Instituto Biologico, Av. Conselheiro
RL   Rodrigues Alves, 1252, Sao Paulo, SP 04014002, Brazil
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1. .828
FT                   /organism="Cowpea aphid-borne mosaic virus"
FT                   /host="passion flower"
FT                   /isolate="Fernao-SP"
FT                   /mol_type="mRNA"
FT                   /country="Brazil"
FT                   /collection_date="Feb-2011"
FT                   /db_xref="taxon:12199"
FT   CDS             <1. .828
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /protein_id="AGK29850.1"
FT                   /translation="SDGNDKELDASKDKVRVKEAKEQSVHQKPAKNKRTKGTERDLATS
FT                   SSGQLVPRLQKISKKMNLPMVAGRVLLNLDHLIEYKPAQIDLYNTRASKTQLSKWFEAI
FT                   KEEYELDEDKMGVIMNGFMVWCIENGTSPDVNGVWTMMDGDEQVEFPLKPIVENAKPTL
FT                   RQIMHHFSDAAEAYIEMRNSEGFYMPRYGLLRNLRDKSLARYAFDFYEVTSKTSDRARE
FT                   AIAQMKAAALANVNTRMFGLDGNVATTSENTERHTATDVNQNMHSLLGMTHGQ"
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SQ   Sequence 828 BP; 280 A; 157 C; 212 G; 179 T; 0 other;

kc777403 Length: 828  30-APR-2013  Type: N  Check: 6005  ..

       1  tctgatggaa acgacaaaga attggatgca agtaaggata aagtaagggt
      51  caaagaagct aaagagcagt cagtgcatca aaagccagcg aagaataaaa
     101  gaaccaaggg aacagagagg gaccttgcaa ctagttcttc aggacaacta
     151  gttccacgcc tacaaaagat tagcaaaaag atgaacttgc ccatggtcgc
     201  tggtagagta cttctcaatt tggatcactt gatagaatat aagccagcgc
     251  aaattgatct atacaacacc agagcttcaa agacacagct cagcaaatgg
     301  tttgaagcca ttaaagaaga gtacgagctg gacgaagaca agatgggtgt
     351  tatcatgaat gggttcatgg tttggtgcat tgaaaatgga acttcacctg
     401  atgtgaatgg agtgtggaca atgatggatg gggacgagca agtggaattt
     451  ccgcttaagc ccatcgtgga aaacgcaaaa cccacactta gacaaattat
     501  gcaccacttc tcagacgcag ccgaagcgta tattgagatg agaaattctg
     551  aagggttcta catgcccagg tacggactgc tgaggaattt aagagacaag
     601  agcttagcaa ggtatgcttt cgatttctat gaagtcacgt ctaagacttc
     651  tgatagagca agggaagcaa tagcgcaaat gaaggctgca gctctcgcca
     701  acgttaacac caggatgttt ggcctggatg ggaatgtggc aacaactagt
     751  gagaacactg agaggcacac tgccactgat gttaatcaga atatgcattc
     801  cctcttgggg atgacgcatg ggcagtaa