Sequence of DPV Peanut clump virus
Peanut clump virus RNA 2 sequence, coat protein P23 and four hypothetical proteins (P39, P51, P14, and P17), complete cds.
ACC No: L07269
Dated: 2000-03-04 | Length: 4504 | CRC: 1894355268
!!NA_SEQUENCE 1.0
ID PNWRNAII standard; RNA; VRL; 4504 BP.
XX
AC L07269;
XX
SV L07269.1
XX
DT 10-JUL-1993 (Rel. 36, Created)
DT 04-MAR-2000 (Rel. 63, Last updated, Version 7)
XX
DE Peanut clump virus RNA 2 sequence, coat protein P23 and four hypothetical
DE proteins (P39, P51, P14, and P17), complete cds.
XX
KW coat protein.
XX
OS Peanut clump virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Pecluvirus.
XX
RN [1]
RP 1-4504
RX MEDLINE; 93303937.
RA Manohar S.K., Guilley H., Dollet M., Richards K., Jonard G.;
RT "Nucleotide sequence and genetic organization of peanut clump virus RNA 2
RT and partial characterization of deleted forms";
RL Virology 195(1):33-41(1993).
XX
RN [2]
RP 1-4504
RA Jonard G.;
RT ;
RL Submitted (07-JUL-1993) to the EMBL/GenBank/DDBJ databases.
RL Gerald Jonard, Institut de Biologie Moleculaire des Plantes, 12 rue du
RL General Zimmer, 67084 Strasbourg (CEDEX) France
XX
DR SPTREMBL; Q08308; Q08308.
DR SPTREMBL; Q08315; Q08315.
DR SPTREMBL; Q08316; Q08316.
DR SPTREMBL; Q08317; Q08317.
DR SPTREMBL; Q08552; Q08552.
XX
CC On Apr 6, 1994 this sequence version replaced gi:294269.
XX
FH Key Location/Qualifiers
FH
FT source 1. .4504
FT /db_xref="taxon:28355"
FT /organism="Peanut clump virus"
FT /isolate="87/TGTA2"
FT CDS 391. .1014
FT /codon_start=1
FT /db_xref="SPTREMBL:Q08308"
FT /standard_name="P23"
FT /product="coat protein"
FT /protein_id="AAA17436.1"
FT /translation="MSNIAEVSRGGGHYGVDPWRQHIIKNRINADWWIRLDHWETLLAD
FT LRGVSFEVNSSRSQVADFINRVPKDLPAGVSVRFPGPRGNLGSTNYTEVYFVRIKSELK
FT QKLLSLIAAADQGKNRDVEIGRPNAPVVSTGAGGNQAIVAQRGVNTVRDQQPLRDGSLH
FT YRYLVQDIELAGAEQFDRALFEETFSLNWTVVAPPAGGGGGGAP"
FT CDS 1011. .2114
FT /codon_start=1
FT /db_xref="SPTREMBL:Q08316"
FT /note="putative"
FT /standard_name="P39"
FT /protein_id="AAA17437.1"
FT /translation="MSDILKVDAPELFLAVTQESKFPGHITVHRLKTFSKSCVLRADFE
FT PNPFGMVFVQGAVVGSVPLSNHRKLSVEGCPNVIESSDLLKLFEKLRMHREIVNMHGQV
FT MIGLKQALVDASGVVKAEYIRCSDVFLWSDFGGCLPLRLWSRYVFCTERFVDDPQLILD
FT GREGEEINILRKEALELQKQVTEQKAVVAELRLQISKQQGASAGTTSSVETSLRQTVEY
FT WKGETQKFKNAWEMIEKERLKLSAEKNRAEYEVNSLTSARNSLQFHLDQLKQQHADTVA
FT QAKRDRESAEKTIDDLNDKLYHYSDRLPVFRNRVRDIRNKLTDQLYLYNRVDLQARNRG
FT QALNREVRALIDAIERDYPYIVWGVMP"
FT CDS 2250. .3590
FT /codon_start=1
FT /db_xref="SPTREMBL:Q08317"
FT /note="putative"
FT /standard_name="P51"
FT /protein_id="AAA17438.1"
FT /translation="MEWRRAFSKKKLEEKVKNMDAKQATDYLLEKVDEQRNLENKLDKR
FT LQNTRKKNKNKEKTRTWAEKYPPVDYYSPEFVENFMKDMRREEFEKSEERRGHKQVRLG
FT SDNFVGDDPLKVLSEEALKAGFQHTGKVMKRFPADVFEKSKFIGMYDRHLTTLREKACC
FT KKERNQIQSKLIQLRQLKPSCDFLAGTVSGVPGSGKSTLLKNVQKKLKNSVCLLANKEL
FT KGDFAGVPSVFSVEEMLLSAVPSSFNVMLVDEYTLTQSAEILLLQRKLGAKIVVLFGDR
FT EQGNTNKLTSPEWLHVPIVFSSDSSHRFGPETAKFCEDQGFSLEGRGGEDKIVKGDYEG
FT EGEDTEVNLCFTEETKADLAEVQVEAFLVSSVQGRTFSSVSLFVRENDKPVFSDPHLRL
FT VAITRHRKLLSIRADPEVWVSFMFATREGEEVDTHCYGEEHRPDEAE"
FT CDS 3556. .3924
FT /codon_start=1
FT /db_xref="SPTREMBL:Q08315"
FT /note="putative"
FT /standard_name="P14"
FT /protein_id="AAA17439.1"
FT /translation="MVKSTVPTRPNKYWPGVVAIGLVSLFIFLSVSNQKHSTTSGDNIH
FT KFSNGGTYRDGSKCITYNRNSPLAYNGSSSNNTLFWLCLLGLSMVWIAYCGYKSLSGQW
FT HSCQHDKNERNFLFECFE"
FT CDS 3767. .4228
FT /codon_start=1
FT /db_xref="SPTREMBL:Q08552"
FT /note="putative"
FT /standard_name="P17"
FT /protein_id="AAA17440.1"
FT /translation="MEAPAITHSSGCVCSDCQWSGSPTVDTKVYLGSGTHANTTKTRET
FT SFLSVLNDNAWLFVIAALILCLYFIISKPHVDAVYTEFHQDLNGFSMKLAPGVPIDPKV
FT IAAVKNWQKYPFGTDPRENMVTSIVSGLRHSFCILLLVVVLLVYVCHKP"
XX
SQ Sequence 4504 BP; 1225 A; 843 C; 1163 G; 1273 T; 0 other;
L07269 Length: 4504 December 21, 2001 15:46 Type: N Check: 2527 ..
1 gtattcggtt ctcttacagt gtagcgtgaa gcggagcacg actagagacc
51 ataccatccc ttgtatccaa accatttctc ttcaccttag ggtgttgaaa
101 ggtgtccaac gaccgtgtag gaaaagaaga gttcgttcgc gactgggctt
151 tgtccctgcc tcttcttctg ttaccatttc gtggattacc tctatcgcct
201 taaggacgag ggtggaacta ccatcggttg gcggtgtctg tgtttaccac
251 tcgtgacgac gttcagaact tctgtacggt tctcttcgtg agactgagca
301 cggctctgcc cgtcagtcgt tttgacattt tcgtctgtag tggagcgcga
351 ataccagggc cggcccttat cggttactta gttaatcctt atgtctaaca
401 ttgctgaggt tagtcgcgga ggaggacatt acggtgtcga tccgtggcgc
451 cagcatatta ttaagaatag gattaacgct gattggtgga ttcgcttaga
501 tcactgggaa accttgttag cggatctgcg aggggtgagt tttgaagtca
551 acagttcgcg ttctcaggtt gctgacttca ttaacagggt tcctaaggac
601 ttacctgctg gtgtgtccgt gaggtttcca ggcccccggg gtaatctcgg
651 cagtacgaat tataccgaag tctatttcgt tagaataaaa tctgagctta
701 aacagaagtt attaagtttg attgctgccg cagatcaggg aaaaaatcgc
751 gacgtggaaa tcggtcgtcc aaacgcccca gttgtgagta ctggtgcggg
801 cggtaaccaa gccatcgttg ctcagagagg tgtcaatact gtgagggacc
851 aacagccttt aagagacggt tccttgcact atcggtattt ggtgcaagac
901 attgagttgg cgggtgctga acagtttgat cgtgcgttat ttgaagagac
951 tttcagtctc aactggactg tcgttgctcc acctgctggt ggtggtggcg
1001 gtggtgcacc atgagcgaca tactcaaagt cgacgctcct gagttatttt
1051 tggccgtaac tcaggagagc aagttcccag gtcatattac tgtgcatagg
1101 ttaaaaactt ttagtaagtc gtgtgtgttg cgtgctgatt ttgaaccaaa
1151 cccttttggt atggtttttg ttcagggagc ggttgtgggt agtgtccctc
1201 tgtccaatca tcgcaaactt tctgttgaag gttgtcccaa cgtgattgag
1251 agttccgatc tgcttaagtt atttgagaaa ctaaggatgc accgggaaat
1301 tgtgaacatg catggtcagg ttatgatagg tcttaagcag gctttggtcg
1351 atgcgagcgg tgtcgtaaaa gctgagtaca tcagatgttc tgatgtattt
1401 ctttggtctg attttggtgg ttgcttgcct ctgcgtttgt ggtcgcgtta
1451 cgtattttgt acggaacgtt ttgttgatga tccacagttg attctggatg
1501 gtcgtgaagg ggaggagata aatatcttac gcaaagaagc gcttgagcta
1551 cagaaacaag tgacggagca aaaggctgtt gtggctgagc tgaggttaca
1601 gatttctaag caacagggcg ctagcgcagg aactacctct tctgtagaga
1651 catcactccg acagactgtg gaatactgga aaggagaaac tcaaaagttt
1701 aagaatgcct gggaaatgat agagaaagag agactgaaac ttagtgcaga
1751 aaagaaccgc gctgagtacg aagtcaattc tcttacttca gccaggaata
1801 gtctgcaatt ccacctagac cagttgaaac agcaacatgc agataccgta
1851 gctcaagcta aacgtgatcg agagtctgca gaaaagacca ttgacgatct
1901 gaatgataag ttgtaccatt atagtgatcg attgccggtg tttcgcaacc
1951 gagttagaga tataaggaac aaactgacgg atcagttgta tctctataat
2001 agggttgact tgcaggctag aaatcggggg caagcgctta acagggaggt
2051 gcgcgcactg atagacgcga tagagcgaga ttacccatat atcgtttggg
2101 gagttatgcc ttgaatgttg tttatgtttt gtttattgtt tttctgtgtt
2151 tttgttactg ttttctagtt gtttaatact tttaactttt cagtttctag
2201 tatgtcgtat tctctcttgt gaatctgttg ttgcggatct acagctttca
2251 tggagtggag aagggcgttc agcaagaaga agttggagga aaaagtgaag
2301 aatatggatg ctaagcaggc tactgactat cttctggaga aagttgacga
2351 gcaacgcaac cttgagaaca agctcgataa gagattgcag aacaccagga
2401 agaagaacaa aaacaaagag aagacgcgaa cgtgggcgga gaagtaccct
2451 cctgtggact attactctcc agaatttgtc gaaaacttca tgaaggacat
2501 gaggagagag gagtttgaaa agtcggagga aagaagaggt cacaaacaag
2551 ttagattggg atctgacaat tttgttggtg acgaccctct gaaagtgtta
2601 tctgaagaag ctctgaaggc cggtttccag catacgggca aagttatgaa
2651 gaggtttcct gcagatgtat ttgagaaatc aaagtttatt ggcatgtatg
2701 acagacacct tactaccctg cgcgaaaagg cgtgttgcaa gaaagagagg
2751 aaccaaattc agtctaagtt gatccagctt aggcagttga agccgtcttg
2801 cgatttctta gctggaacag taagcggtgt ccctggctca ggaaaaagta
2851 cactgctgaa gaacgtgcag aaaaagttaa agaattctgt ctgtttgctt
2901 gctaataagg aactgaaagg tgactttgca ggtgtaccct cagtattttc
2951 agtagaggaa atgttgttgt cggctgtacc gtcaagtttt aatgttatgt
3001 tagtcgatga gtatacatta actcaaagtg ctgaaatctt gctcttgcaa
3051 aggaaactag gagctaagat tgttgtattg tttggtgaca gagagcaagg
3101 taacacaaac aaactgacaa gtccggagtg gttgcatgtg cctattgtct
3151 tttcaagcga ttcgagtcat cgtttcggtc ctgaaacagc gaagttctgt
3201 gaagatcaag gtttctcctt agaaggaaga gggggcgaag ataaaattgt
3251 gaaaggtgac tacgaaggtg aaggagagga tacggaagtt aatctctgct
3301 ttactgaaga aacaaaagcc gatctcgctg aagtgcaagt ggaagccttt
3351 cttgtgtcta gtgtccaagg caggacattt tcaagtgtgt cattgtttgt
3401 gagggagaac gataaaccag ttttttcaga ccctcatttg cgcttggtcg
3451 ctattactag acacagaaag ctgctaagta ttagagctga cccagaagtc
3501 tgggtaagtt ttatgtttgc aacgcgagag ggcgaagaag tagacacaca
3551 ttgctatggt gaagagcacc gtcccgacga ggccgaataa atattggccg
3601 ggagtcgtag ctataggttt agtgtctttg tttatcttct tgtctgtgtc
3651 gaaccaaaaa cattctacca cttctggtga caacatacat aagttttcca
3701 acggaggaac ttatagagac gggtctaagt gcataacgta taataggaac
3751 tctcctttag cttacaatgg aagctccagc aataacacac tcttctggtt
3801 gtgtctgctc ggactgtcaa tggtctggat cgcctactgt ggatacaaaa
3851 gtttatctgg gcagtggcac tcatgccaac acgacaaaaa cgagagaaac
3901 ttcctttttg agtgttttga atgataatgc ttggttgttt gttattgctg
3951 ctctcatatt atgtctgtat ttcatcataa gtaaacctca tgtggatgca
4001 gtatatacag agttccatca agatctaaat ggtttcagta tgaaactagc
4051 cccgggtgtg cctattgatc caaaggtcat cgcagctgta aaaaattggc
4101 aaaaatatcc ttttgggact gatcctagag agaatatggt aactagtatt
4151 gtaagtggtt taaggcatag cttttgcatc ctactacttg tagttgtatt
4201 acttgtttat gtgtgtcata aaccctaaaa atacaaaaat gattaaaccg
4251 agattgatca actcggggcg gtgcgagcca tagagcacgg ttgtaggttt
4301 aaacttaaaa ccttcaagtc tcattcccta gctattataa ggttaattgc
4351 aaaaaccctt atatctggct aagatgggag tgccgacaag ttgtcgggag
4401 tgtcaagcac gacacttagt ggctggcgta gactgctggt atgtgaactc
4451 atagagttca cataggtgca aatcccccgc tgaaacggag cgatatccgt
4501 ccca