Sequence of DPV Tomato spotted wilt virus

Tomato spotted wilt virus strain TSWV-BL nucleocapsid protein gene, complete cds.

ACC No: L20953

Dated: 2001-02-13 | Length: 2037 | CRC: 1484518043

                !!NA_SEQUENCE 1.0
ID   TSPNUCPSD  standard; RNA; VRL; 2037 BP.
XX
AC   L20953;
XX
SV   L20953.1
XX
DT   23-JUL-1993 (Rel. 36, Created)
DT   13-FEB-2001 (Rel. 66, Last updated, Version 6)
XX
DE   Tomato spotted wilt virus strain TSWV-BL nucleocapsid protein gene,
DE   complete cds.
XX
KW   nucleocapsid protein.
XX
OS   tomato spotted wilt virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN   [1]
RP   1-2037
RA   Pang S.Z., Nagpala P.G., Wang M., Slightom J.L., Gonsalves D.;
RT   "Resistance to heterologous isolates of tomato spotted wilt virus in
RT   transgenic tobacco expressing its nucleocapsid protein gene";
RL   Phytopathology 82:1223-1229(1992).
XX
DR   SPTREMBL; Q08468; Q08468.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2037
FT                   /db_xref="taxon:11613"
FT                   /organism="tomato spotted wilt virus"
FT                   /strain="TSWV-BL"
FT   misc_feature    773. .1263
FT                   /standard_name="intergenic spacer"
FT   primer_bind     1177. .1196
FT                   /standard_name="PCR primer"
FT   CDS             complement(1264. .2034)
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q08468"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="AAA53346.1"
FT                   /translation="MVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQIKK
FT                   MSIISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRLVE
FT                   ETGNSENLNTIKSKIASHPLSQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMISVV
FT                   LAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKRKAFEMNEDQVKKGKEYAAILSSSNP
FT                   NAKGSIAMEHYSETLNKFYEMFGVKKQAKLTELA"
FT   primer_bind     complement(2011. .2032)
FT                   /standard_name="PCR primer"
XX
SQ   Sequence 2037 BP; 651 A; 383 C; 300 G; 703 T; 0 other;

L20953  Length: 2037  December 21, 2001 15:46  Type: N  Check: 5034  ..

       1  gagctcgaat tctcttgcag tgaaatctct gctcatgtta gcagaaaaca
      51  acatcatgcc taactctcaa gcttttgtca aagcttctac tgattctaat
     101  ttcaagctga gcctctggct aagggttcca aaggttttga agcagatttc
     151  cattcagaaa ttgttcaagg ttgcaggaga tgaaacaaat aaaacatttt
     201  atttatctat tgcctgcatt ccaaaccata acagtgttga gacagcttta
     251  aacattactg ttatttgcaa gcatcagctc ccaattcgta aatgtaaaac
     301  tccttttgaa ttatcaatga tgttttctga tttaaaggag ccttacaaca
     351  ttattcatga tccttcatat ccccaaagga ttgttcatgc tctgcttgaa
     401  actcacacat cttttgcaca agttctttgc aacaacttgc aagaagatgt
     451  gatcatctac accttgaaca accatgagct aactcctgga aagttagatt
     501  taggtgaaat aactttgaat tacaatgaag acgcctacaa aaggaaatat
     551  ttcctttcaa aaacacttga atgtcttcca tctaacatac aaactatgtc
     601  ttatttagac agcatccaaa tcccttcctg gaagatagac tttgccaggg
     651  gagaaattaa aatttctcca caatctattt cagttgcaaa atctttgtta
     701  aatcttgatt taagcgggat taaaaagaaa gaatctaaga ttaaggaagc
     751  atatgcttca ggatcaaaat gatcttgctg tgtccagctt tttctaatta
     801  tgttatgttt attttctttc tttacttata attatttttc tgtttgtcat
     851  ttctttcaaa ttcctcctgt ctagtagaaa ccataaaaac aaaaataaaa
     901  ataaaataaa atcaaaataa aataaaaatc aaaaaatgaa ataaaagcaa
     951  caaaaaaatt aaaaaacaaa aaaccaaaaa agatcccgaa aggacaattt
    1001  tggccaaatt tggggtttgt ttttgttttt tgtttttttg ttttttgttt
    1051  ttatttttat ttttattttt atttttattt tattttattt tatgtttttg
    1101  ttgtttttgt tattttgtta tttattaagc acaacacaca gaaagcaaac
    1151  tttaattaaa cacacttatt taaaatttaa cacactaagc aagcacaaac
    1201  aataaagata aagaaagctt tatatattta taggcttttt tataatttaa
    1251  cttacagctg cttttaagca agttctgtga gttttgcctg ttttttaacc
    1301  ccaaacattt catagaactt gttaagggtt tcactgtaat gttccatagc
    1351  aatacttcct ttagcattag gattgctgga gctaagtata gcagcatact
    1401  ctttcccctt cttcacctga tcttcattca tttcaaatgc ttttcttttc
    1451  agcacagtgc aaacttttcc taaggcttcc ctggtgtcat acttctttgg
    1501  gtcgatcccg agatccttgt attttgcatc ctgatatata gccaagacaa
    1551  cactgatcat ctcaaagcta tcaactgaag caataagagg taagctacct
    1601  cccagcatta tggcaagcct cacagacttt gcatcatcaa gaggtaatcc
    1651  ataggcttga ctcaaagggt gggaagcaat cttagatttg atagtattga
    1701  gattctcaga attcccagtt tcctcaacaa gcctgaccct gatcaagcta
    1751  tcaagccttc tgaaggtcat gtcagtggct ccaatcctgt ctgaagtttt
    1801  ctttatggta attttaccaa aagtaaaatc gctttgctta ataaccttca
    1851  ttatgctctg acgattcttc aggaatgtca gacatgaaat aatgctcatc
    1901  tttttgatct ggtcaaggtt ttccagacaa aaagtcttga agttgaatgc
    1951  taccagattc tgatcttcct caaactcaag gtctttgcct tgtgtcaaca
    2001  aagcaacaat gctttcctta gtgagcttaa ccatgga