Sequence of DPV Chino del tomate virus

Tomato leaf crumple geminivirus (clone pTMX44B) nuclear export factor (nef) gene, complete cds.

ACC No: L34749

Dated: 2000-03-04 | Length: 771 | CRC: 165274698

                !!NA_SEQUENCE 1.0
ID   PARTLGDNA  standard; DNA; VRL; 771 BP.
XX
AC   L34749;
XX
SV   L34749.1
XX
DT   29-NOV-1994 (Rel. 41, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Tomato leaf crumple geminivirus (clone pTMX44B) nuclear export factor (nef)
DE   gene, complete cds.
XX
KW   nuclear export factor.
XX
OS   tomato leaf crumple virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-771
RA   Paplomatas E.J., Patel V.P., Hou Y.-M., Noueiry A.O., Gilbertson R.L.;
RT   "Molecular characterization of a new sap-transmissible bipartite genome
RT   geminivirus infecting tomatoes in Mexico";
RL   Phytopathology 0:0-0(1994).
XX
DR   SPTREMBL; Q84397; Q84397.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .771
FT                   /db_xref="taxon:32609"
FT                   /organism="tomato leaf crumple virus"
FT                   /lab_host="Nicotiana benthamiana"
FT   CDS             1. .771
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q84397"
FT                   /gene="nef"
FT                   /product="nuclear export factor"
FT                   /protein_id="AAA47927.1"
FT                   /translation="MYPFRSKRGTTYVARRSYSRNNVFKRSTISKRDDGRRRSVNATKP
FT                   SVEPKMTAQRMHENQFGPDFVMAHNAALSTFISFPGLGKTQPNRSRSYIKLKRLRFKGT
FT                   VKIERVTSDMNMDGSIPKVEGVFSLVVVVDRKPHLGASGCLHTFDELFGARIHSHGNLS
FT                   ITPSLKDRFYIRHVFKRVLSVEKDSMMVDVEGSTALSNRRFNCWSTFKDIDRDSCNGVY
FT                   ANISKNALLVYYCWMSDTMSRASSFVSFDLDYIG"
XX
SQ   Sequence 771 BP; 193 A; 169 C; 182 G; 227 T; 0 other;

 L34749  Length: 771  December 21, 2001 15:46  Type: N  Check: 8985  ..

       1  atgtatcctt ttcggtctaa gcgtggtacc acgtatgttg cacgtcgttc
      51  ttattcacgt aataatgtgt ttaagcgatc aaccatctcc aaacgagatg
     101  atgggagacg tcgatctgtt aatgcaacta agcccagtgt cgagcccaag
     151  atgacagccc aacgcatgca cgagaatcag tttgggccag attttgtaat
     201  ggcccataat gctgccttgt ctacatttat cagctttcct ggtctgggta
     251  agactcaacc gaaccgaagc aggtcgtaca tcaagctgaa acgtctgcgt
     301  ttcaaaggta cggtgaaaat cgaacgtgtc acgtctgata tgaacatgga
     351  cggttctatc ccgaaggtcg aaggagtttt ctctctcgtt gtcgttgtgg
     401  accgtaaacc ccaccttggt gcgtccggct gtctgcatac gttcgatgaa
     451  ctatttggcg ctaggatcca cagccatgga aacctcagca taaccccttc
     501  tttgaaagac cgtttttaca taagacacgt gttcaaacgt gtattgtctg
     551  tggagaagga tagtatgatg gttgatgttg aagggtccac agctctctct
     601  aacaggcgtt tcaattgttg gtccactttt aaggatattg atcgtgattc
     651  atgtaacggc gtttatgcca acatcagcaa gaacgccctg ttagtctatt
     701  attgttggat gtcagatact atgtctagag cgtcaagttt tgtatcgttt
     751  gacctcgatt atatcggatg a