Sequence of DPV Sin Nombre virus

Sin Nombre virus (NM R11) RNA S segment encoding nucleocapsid protein (N protein), complete cds.

ACC No: L37904

Dated: 2000-03-04 | Length: 2060 | CRC: -2023856327

                !!NA_SEQUENCE 1.0
ID   SNNUPR     standard; RNA; VRL; 2060 BP.
XX
AC   L37904;
XX
SV   L37904.1
XX
DT   27-SEP-1995 (Rel. 45, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 3)
XX
DE   Sin Nombre virus (NM R11) RNA S segment encoding nucleocapsid protein (N
DE   protein), complete cds.
XX
KW   nucleocapsid protein.
XX
OS   Sin Nombre hantavirus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Hantavirus.
XX
RN   [1]
RP   1-2060
RX   MEDLINE; 96079073.
RA   Chizhikov V.E., Spiropoulou C.F., Morzunov S.P., Monroe M.C., Peters C.J.,
RA   Nichol S.T.;
RT   "Complete genetic characterization and analysis of isolation of Sin Nombre
RT   virus";
RL   J. Virol. 69(12):8132-8136(1995).
XX
DR   SPTREMBL; Q89462; Q89462.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2060
FT                   /db_xref="taxon:37705"
FT                   /organism="Sin Nombre hantavirus"
FT                   /isolate="NM R11"
FT                   /lab_host="E6 Vero cells"
FT                   /specific_host="Peromyscus maniculatus"
FT   CDS             43. .1329
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q89462"
FT                   /evidence=EXPERIMENTAL
FT                   /product="nucleocapsid protein"
FT                   /protein_id="AAC42203.1"
FT                   /translation="MSTLKEVQDNITLHEQQLVTARQKLKDAERAVELDPDDVNKSTLQ
FT                   SRRAAVSALETKLGELKRELADLIAAQKLASKPVDPTGIEPDDHLKEKSSLRYGNVLDV
FT                   NSIDLEEPSGQTADWKSIGLYILSFALPIILKALYMLSTRGRQTIKENKGTRIRFKDDS
FT                   SYEEVNGIRKPRHLYVSMPTAQSTMKADEITPGRFRTIACGLFPAQVKARNIISPVMGV
FT                   IGFSFFVKDWMERIDDFLAARCPFLPEQKDPRDAALATNRAYFITRQLQVDESKVSDIE
FT                   DLIADARAESATIFADIATPHSVWVFACAPDRCPPTALYVAGMPELGAFFAILQDMRNT
FT                   IMASKSVGTSEEKLKKKSAFYQSYLRRTQSMGIQLDQKIIILYMSHWGREAVNHFHLGD
FT                   DMDPELRELAQTLVDIKVREISNQEPLKL"
XX
SQ   Sequence 2060 BP; 624 A; 372 C; 423 G; 641 T; 0 other;

 L37904  Length: 2060  December 21, 2001 15:46  Type: N  Check: 149  ..

       1  tagtagtaga ctccttgaga agctactacg actaaagctg gaatgagcac
      51  cctcaaagaa gtgcaagaca acatcactct ccacgaacaa caactcgtga
     101  ctgccaggca gaagctcaaa gatgcagaaa gagcggtgga attggacccc
     151  gatgatgtta acaaaagcac attacagagc agacgggcag ctgtgtctgc
     201  attggagacc aaactcggag aacttaagcg ggaactggct gatcttattg
     251  cagctcagaa attggcttca aaacctgttg atccaacagg gattgaacct
     301  gatgaccatc taaaggaaaa gtcatcattg agatatggaa atgttcttga
     351  tgtaaattcc attgacttag aagagccaag tgggcaaaca gctgattgga
     401  aatccatcgg actctacatt ctaagtttcg cattaccgat tattcttaaa
     451  gccttgtaca tgttatctac taggggccgt caaacaatca aagaaaacaa
     501  gggaacaaga attcgattca aggatgattc atcttatgaa gaagtcaatg
     551  ggatacgtaa gccaagacat ctgtatgttt ctatgccaac tgcccagtct
     601  acaatgaaag cagatgagat tactcccggg aggttccgta caattgcttg
     651  tggattattc ccagcccaag tcaaagcaag gaatattatc agtcctgtca
     701  tgggtgtgat tggctttagt ttttttgtga aagattggat ggaaaggatt
     751  gatgacttcc tggctgcacg ttgcccattt ctgcctgagc agaaagaccc
     801  tagagatgct gcattggcaa ctaatagagc ctattttata acacgtcaat
     851  tacaggttga tgagtcaaag gttagtgata ttgaggacct gattgctgat
     901  gcaagggctg agtctgccac tatattcgca gatattgcta ctcctcattc
     951  agtttgggtc tttgcatgtg ctccagatcg ttgtccacct acagcattat
    1001  atgtggccgg gatgccggaa ctgggtgcat tttttgctat tctccaggat
    1051  atgaggaaca ccataatggc atcaaaatct gtggggacat ctgaagagaa
    1101  attgaagaag aaatcagcat tctaccagtc atacttaaga cgtactcagt
    1151  caatgggaat tcaactggac cagaagataa tcatcttata catgagccat
    1201  tggggaagag aggccgtgaa tcacttccat cttggagatg atatggatcc
    1251  tgagcttagg gaacttgccc agacccttgt agatatcaag gtcagggaaa
    1301  tctctaacca agaaccactt aaactttaag tggggcagta atcaacttat
    1351  attcagggca ttattataac cagggtaatg ggcactaatc agggtttatt
    1401  gcactagggt gggttcaagg gccaactata tcacagggta tataatctat
    1451  attgtttagt gttattgtag tattgtatta tgtattgtta gttaagctta
    1501  ttaaatcttg ttaagtttgt taagttttgt taagttgtat taagttttgt
    1551  taagtttcgg taagtctgtt aaatgtagtt aatcttgata gtattaagtc
    1601  atatgtatgg ggggtgttta gtgttaagtc attgtttatt gtttattgtt
    1651  atctgtttaa tgttaagtct atatgattta ttaatcaaaa taagatttat
    1701  atacatagat ttattttata tacatagatt tattttatca actcattatc
    1751  atctctcatc attaatcagg gtttataaaa ttttctcagg tctatcccta
    1801  tattggaaga ttgttctatt aaccgttcaa actggaacta acactgtgac
    1851  tctgtaaagt ccagattata ttcacatctg tatatatgga tgtaaatttc
    1901  gttccgttaa tagtacatga cactaatgct tgctttgcta ctaattgatt
    1951  tcttcattac aacaatctac ctcattgtcc ctatcccctt ccctattacc
    2001  tcaacaaaac tacctcatta taagtaaatt cttgattgct tttcaaggag
    2051  catactacta