Sequence of DPV Rift Valley fever virus
Rift Valley fever virus (phlebovirus, RVFV) M RNA segment, complete sequence, encoding glycoproteins G1 and G2.
ACC No: M11157
Dated: 2000-03-04 | Length: 3884 | CRC: -1512855215
!!NA_SEQUENCE 1.0
ID RVFMRNA standard; RNA; VRL; 3884 BP.
XX
AC M11157;
XX
SV M11157.1
XX
DT 16-JUL-1988 (Rel. 16, Created)
DT 04-MAR-2000 (Rel. 63, Last updated, Version 3)
XX
DE Rift Valley fever virus (phlebovirus, RVFV) M RNA segment, complete
DE sequence, encoding glycoproteins G1 and G2.
XX
KW glycoprotein; nonstructural protein.
XX
OS Rift Valley fever virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus.
XX
RN [1]
RP 1-3884
RX MEDLINE; 86045943.
RA Collett M.S., Purchio A.F., Keegan K., Frazier S., Hays W., Anderson D.K.,
RA Parker M.D., Schmaljohn C., Schmidt J., Dalrymple J.M.;
RT "Complete nucleotide sequence of the M RNA segment of Rift Valley fever
RT virus";
RL Virology 144:228-245(1985).
XX
DR SWISS-PROT; P03518; VGLM_RVFV.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3884
FT /db_xref="taxon:11588"
FT /organism="Rift Valley fever virus"
FT mat_peptide <1. .479
FT /note="nonstructural protein (NSm) (put.); putative"
FT CDS 21. .3641
FT /codon_start=1
FT /db_xref="SWISS-PROT:P03518"
FT /note="River Valley virus polyprotein"
FT /protein_id="AAA47450.1"
FT /translation="MYVLLTILISVLVCEAVIRVSLSSTREETCFGDSTNPEMIEGAWD
FT SLREEEMPEELSCSISGIREVKTSSQELYRALKAIIAADGLNNITCHGKDPEDKISLIK
FT GPPHKKRVGIVRCERRRDAKQIGRETMAGIAMTVLPALAVFALAPVVFAEDPHLRNRPG
FT KGHNYIDGMTQEDATCKPVTYAGACSSFDVLLEKGKFPLFQSYAHHRTLLEAVHDTIIA
FT KADPPSCDLQSAHGNPCMKEKLVMKTHCPNDYQSAHYLNNDGKMASVKCPPKYGLTEDC
FT NFCRQMTGASLKKGSYPLQDLFCQSSEDDGSKLKTKMKGVCEVGVQAHKKCDGQLSTAH
FT EVVPFAVFKNSKKVYLDKLDLKTEENLLPDSFVCFEHKGQYKGTMDSGQTKRELKSFDI
FT SQCPKIGGHGSKKCTGDAAFCSAYECTAQYANAYCSHANGSGIVQIQVSGVWKKPLCVG
FT YERVVVKRELSAKPIQRVEPCTTCITKCEPHGLVVRSTGFKISSAVACASGVCVTGSQS
FT PSTEITLKYPGISQSSGGDIGVHMAHDDQSVSSKIVAHCPPQDPCLVHGCIVCAHGLIN
FT YQCHTALSAFVVVFVFSSIAIICLAVLYRVLKCLKIAPRKVLNPLMWITAFIRWIYKKM
FT VARVAHNINQVNREIGWMEGGQLVLGNPAPIPRHAPIPRYSTYLMLLLIVSYASACSEL
FT IQASSRITTCSTEGVNTKCRLSGTALIRAGSVGAEACLMLKGVKEDQTKFLKIKTVSSE
FT LSCREGQSYWTGSISPKCLSSRRCHLVGECHVNRCLSWRDNETSAEFSFVGESTTMREN
FT KCFEQCGGWGCGCFNVNPSCLFVHTYLQSVRKEALRVFNCIDWVHKLTLEITDFDGSVS
FT TIDLGASSSRFTNWGSVSLSLDAEGISGSNSFSFIESPSKGYAIVDEPFSEIPRQGFLG
FT EIRCNSESSVLSAHESCLRAPNLISYKPMIDQLECTTNLIDPFVVFERGSLPQTRNDKT
FT FAASKGNRGVQAFSKGSVQADLTLMFDNFEVDFVGAAVSCDAAFLNLTGCYSCNAGARV
FT CLSITSTGTGSLSAHNKDGSLHIVLPSENGTKDQCQILHFTVPEVEEEFMYSCDGDERP
FT LLVKGTLIAIDPFDDRREAGGESTVVNPKSGSWNFFDWFSGLMSWFGGPLKLYSSFACM
FT LHYQLGSFSSLYILEEQASLKCGLLPLRRPHRSVRVKVIC"
FT mat_peptide 480. .2090
FT /note="glycoprotein 2 (gp2) (put.); putative"
FT mat_peptide 2091. .3638
FT /note="glycoprotein 1 (gp1) (put.); putative"
XX
SQ Sequence 3884 BP; 1060 A; 781 C; 987 G; 1056 T; 0 other;
M11157 Length: 3884 December 21, 2001 15:47 Type: N Check: 94 ..
1 acacaaagac ggtgcattaa atgtatgttt tattaacaat tctaatctcg
51 gttctggtgt gtgaagcggt tattagagtg tctctaagct ccacaagaga
101 agagacctgc tttggtgact ccactaaccc agagatgatt gaaggagctt
151 gggattcact cagagaggag gagatgccgg aggagctctc ctgttctata
201 tcaggcataa gagaggttaa gacctcaagc caggagttat acagggcatt
251 aaaagccatc attgctgctg atggcttgaa caacatcacc tgccatggta
301 aggatcctga ggacaagatt tccctcataa agggtcctcc tcacaaaaag
351 cgggtgggga tagttcggtg tgagagacga agagatgcta agcaaatagg
401 gagagaaacc atggcaggga ttgcaatgac agtccttcca gccttagcag
451 tttttgcttt ggcacctgtt gtttttgctg aagaccccca tctcagaaac
501 agaccaggga aggggcacaa ctacattgac gggatgactc aggaggatgc
551 cacatgcaaa cctgtgacat atgctggggc atgtagcagt tttgatgtct
601 tgcttgaaaa gggaaaattt ccccttttcc agtcgtatgc tcatcataga
651 actctactag aggcagttca cgacaccatc attgcaaagg ctgatccacc
701 tagctgtgac cttcagagtg ctcatgggaa cccctgcatg aaagagaaac
751 tcgtgatgaa gacacactgt ccaaatgact accagtcagc tcattacctc
801 aacaatgacg ggaaaatggc ttcagtcaag tgccctccta agtatgggct
851 cactgaggac tgcaactttt gtaggcagat gacaggtgct agcctgaaga
901 aggggtctta tcctctccaa gacttgtttt gtcagtcaag tgaggatgat
951 ggatcaaaat taaaaacaaa aatgaaaggg gtctgcgaag tgggggttca
1001 agcacacaaa aagtgtgatg gccaactcag cactgcacat gaggttgtgc
1051 cctttgcagt gtttaagaac tcaaagaagg tttatcttga taagcttgac
1101 cttaagactg aggagaatct gctaccagac tcatttgtct gtttcgagca
1151 taagggacag tacaaaggaa caatggactc tggtcagact aagagggagc
1201 tcaaaagctt tgatatctct cagtgcccca agattggagg acatggtagt
1251 aagaagtgca ctggggacgc agcattttgc tctgcttatg agtgcactgc
1301 tcagtacgcc aatgcctatt gttcacatgc taatgggtca gggattgtgc
1351 agatacaagt atcaggggtc tggaagaagc ctttatgtgt agggtatgag
1401 agagtggttg tgaagagaga actctctgcc aagcccatcc agagagttga
1451 gccttgcaca acttgtataa ccaaatgtga gcctcatgga ttggttgtcc
1501 gatcaacagg gttcaagata tcatcagcag ttgcttgtgc tagcggagtt
1551 tgcgtcacag gatcgcagag tccttccacc gagattacac tcaagtatcc
1601 agggatatcc cagtcttctg ggggggacat aggggttcac atggcacacg
1651 atgatcagtc agttagctcc aaaatagtag ctcactgccc tccccaggac
1701 ccgtgtttag tgcatggctg catagtgtgt gctcatggcc tgataaatta
1751 ccagtgtcac actgctctca gtgcctttgt tgttgtgttt gtattcagtt
1801 ctattgcaat aatttgttta gctgttcttt atagggtgct taagtgcctg
1851 aagattgccc caaggaaagt tctgaatcca ctaatgtgga tcacagcctt
1901 catcagatgg atatataaga agatggttgc cagagtggca cacaacatta
1951 atcaagtgaa cagggaaata ggatggatgg aaggaggtca gttggttcta
2001 gggaaccctg cccctattcc tcgtcatgcc ccaatcccac gttatagcac
2051 atacctgatg ttattattga ttgtctcata tgcatcagca tgttcagaac
2101 tgattcaggc aagctccaga atcaccactt gctctacaga gggtgttaac
2151 accaagtgta gactgtctgg cacagcattg atcagagcag ggtcagttgg
2201 ggcagaggct tgtttgatgt tgaagggggt caaggaagat caaaccaagt
2251 tcttaaagat aaaaactgtc tcaagtgagc tatcatgcag ggagggccag
2301 agttattgga ctgggtccat tagccctaaa tgtttgagct caaggagatg
2351 ccaccttgtc ggggaatgcc atgtgaatag gtgtctgtct tggagggaca
2401 atgaaacttc agcagagttt tcatttgttg gggaaagcac gaccatgcga
2451 gagaataagt gttttgagca atgtggagga tgggggtgtg ggtgtttcaa
2501 tgtgaaccca tcttgcttat ttgtgcacac gtatctgcag tcagttagaa
2551 aagaggccct tagagttttt aactgtatcg actgggtgca taaactcact
2601 ctagagatca cagactttga tggctctgtt tcaacaatag acttgggagc
2651 atcatctagc cgtttcacaa actggggttc agttagcctc tcactggacg
2701 cagagggcat ctcaggctca aatagctttt ctttcattga gagcccaagc
2751 aaagggtatg caattgttga tgagccattc tcagaaattc ctcggcaagg
2801 gttcttgggg gagatcaggt gcaattcaga gtcctcagtc ctgagtgctc
2851 atgaatcatg ccttagggca ccaaacctta tctcatacaa gcccatgata
2901 gatcaattgg agtgcacaac aaatctgatt gatccctttg ttgtctttga
2951 gaggggttct ctgccacaga caaggaatga taaaaccttt gcagcttcaa
3001 aaggaaatag aggtgttcaa gctttctcta agggctctgt acaagctgat
3051 ctaactctga tgtttgacaa ttttgaggtg gactttgtgg gagcagccgt
3101 atcttgtgat gccgccttct taaatttgac aggttgctat tcttgcaatg
3151 caggggccag ggtctgcctg tctatcacat ccacaggaac tggatctctc
3201 tctgcccaca ataaggatgg gtctctgcat atagtccttc catcagagaa
3251 tggaacaaaa gaccagtgtc agatactaca cttcactgtg cctgaagtag
3301 aggaggagtt tatgtactct tgtgatggag atgagcggcc tctgttggtg
3351 aaggggaccc tgatagccat tgatccattt gatgataggc gggaagcagg
3401 gggggaatca acagttgtga atccaaaatc tggatcttgg aatttctttg
3451 actggttttc tggactcatg agttggtttg gagggcctct taaactatac
3501 tcctcatttg cctgtatgtt gcattatcaa ttgggctctt tttcctcctt
3551 atatatcttg gaagaacagg cctctctaaa atgtggcttg ctgccactaa
3601 gaaggcctca tagatcagta cgtgtaaaag taatatgttg aaataagtag
3651 acacaagcaa acctaattat gtaagtgttg tacagatagg tcaaattatt
3701 ggaatatcca agcttagaaa cttatgcaat aatactttag atgtaagctt
3751 agttgtaatt tggggtggtg gggtgaggca gcagcagtct caagtgcttg
3801 tgaatattct agttggcgta atcgtctttt gccagattag ctgggaatta
3851 aactaactct ttgaagttgc accggtcttt gtgt