Sequence of DPV Influenza C virus

Influenza C/California/78 nucleoprotein RNA (seg 5), complete cds.

ACC No: M17700

Dated: 2000-03-04 | Length: 1797 | CRC: 862952768

                !!NA_SEQUENCE 1.0
ID   ORFLCNPC   standard; RNA; VRL; 1797 BP.
XX
AC   M17700;
XX
SV   M17700.1
XX
DT   02-APR-1988 (Rel. 15, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Influenza C/California/78 nucleoprotein RNA (seg 5), complete cds.
XX
KW   nucleoprotein.
XX
OS   Influenzavirus C
OC   Viruses; ssRNA negative-strand viruses; Orthomyxoviridae.
XX
RN   [1]
RP   1-1797
RX   MEDLINE; 85170522.
RA   Nakada S., Creager R.S., Krystal M., Palese P.;
RT   "Complete nucleotide sequence of the influenza C/California/78 virus
RT   nucleoprotein gene";
RL   Virus Res. 1:433-441(1984).
XX
DR   SWISS-PROT; P08028; VNUC_INCCA.
XX
CC   Reprint of [1] kindly provided by P.Palese, 17-NOV-1987. The poly-A
CC   rich tract at positions 1777-1781 probably represents the
CC   polyadenylation site for the virion mRNA.  The 12 nucleotides
CC   preceding the 5' end of the sequence below are probably preserved
CC   between influenza C/California and the C.JHG/66 virus RNA
CC   (Desselberger et al., Gene 8, 315-328 (1980)).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1797
FT                   /db_xref="taxon:11552"
FT                   /organism="Influenzavirus C"
FT   CDS             18. .1715
FT                   /codon_start=1
FT                   /db_xref="SWISS-PROT:P08028"
FT                   /note="nucleoprotein"
FT                   /protein_id="AAA43798.1"
FT                   /translation="MSDRRQNRKTPDEQRKANALIINENIEAYIAICKEVGLNGDEMLI
FT                   LENGIAIEKAIRICCDGKYQEKREKKAREAQRADSNFNADSIGIRLVKRAGSGTNITYH
FT                   AVVELTSRSRIVQILKSHWGNELNRAKIAGKRLGFSALFASNLEAIIYQRGRNAARRNG
FT                   SAELFTLTQGAGIETRYKWIMEKHIGIGVLIADAKGLINGKREGKRGVDANVKLRAGTT
FT                   GSPLERAMQGIEKKAFPGPLRALARRVVKANYNDAREALNVIAEASLLLKPQITNKMTM
FT                   PWCMWLAARLTLKDEFTNFCAYAGRRAFEVFNIAMEKIGICSFQGTIMNDDEIESIEDK
FT                   AQVLMMACFGLAYEDFSLVSAMVSHPLKLRNRMKIGNFRVGEKVSTVLSPLLRFTRWAA
FT                   FAQRFALQANTSREGTQISNSAVFAVERKITTDVQRVEELLNKVQAHEDEPLQTLYKKV
FT                   REQISIIGRNKSEIKEFLGSSMYDLNDQEKQNPINFRSGAHPFFFEFDPDYNPIRVKRP
FT                   KKPIAKRNSNISRLEEEGMDENSEIGQAKKMKPLDQLASTSSNIPGEN"
XX
SQ   Sequence 1797 BP; 669 A; 315 C; 383 G; 430 T; 0 other;

M17700  Length: 1797  September 18, 2002 10:52  Type: N  Check: 527  ..

       1  agatttggtt ttcaaaaatg tctgacagac gtcaaaacag aaaaacgcca
      51  gatgagcaac gcaaagccaa tgctctcata ataaatgaga acattgaagc
     101  ctacattgcc atttgtaagg aagtgggcct taatggcgat gaaatgttga
     151  tcctggaaaa tggcatagca attgaaaaag ctataagaat atgttgtgat
     201  ggaaagtatc aagagaagag ggaaaagaaa gcaagagaag cccaaagagc
     251  ggacagcaac ttcaacgcag attccattgg gatcagacta gttaaaagag
     301  ctggttcagg caccaatata acctaccatg cagttgttga actgacaagc
     351  cgctcaagaa ttgttcaaat tctcaaatct cattggggaa atgaactaaa
     401  cagagcaaaa attgcaggaa aaagactcgg cttctctgca ctctttgctt
     451  ctaacttaga agcaattatt tatcaaagag gaagaaacgc agcaagaaga
     501  aacggttctg ctgaattgtt cactctcact caaggggctg gaattgaaac
     551  tagatataaa tggataatgg aaaagcacat cggaattgga gttcttatag
     601  ctgacgcgaa aggtttaata aatggaaaga gagaaggcaa aagaggagtt
     651  gatgccaatg taaaattgag agcaggaacg actggttccc ctctggaaag
     701  agccatgcaa ggaattgaga aaaaagcgtt tcctggacct ttaagagcac
     751  tagcaagaag agttgtaaaa gcaaactaca atgatgccag agaagctcta
     801  aatgtcatcg cagaagcatc actcctgtta aagcctcaaa taaccaacaa
     851  gatgacaatg ccttggtgta tgtggctggc tgccagactt actctgaaag
     901  atgagtttac caatttctgt gcatatgcgg gaagaagagc ctttgaggtc
     951  ttcaatattg caatggagaa aattggaatt tgttcctttc aagggacaat
    1001  aatgaacgat gatgaaattg aatcaataga ggacaaggct caagtattga
    1051  tgatggcatg ctttggactt gcttatgaag acttcagttt ggtctctgct
    1101  atggtcagcc accctcttaa gttgagaaac agaatgaaaa taggaaactt
    1151  cagagtcggt gaaaaagttt caacagtgct ttctccctta ttgagattca
    1201  caagatgggc agcatttgct caaagatttg ctcttcaggc aaatacttca
    1251  agagaaggca ctcaaatcag caattcagca gtttttgcag tggaaaggaa
    1301  aataaccaca gatgtccaaa gagttgaaga gctactaaat aaagttcaag
    1351  ctcacgaaga cgaaccatta caaacacttt acaaaaaagt aagagaacaa
    1401  atttccataa ttggaaggaa caagtccgaa ataaaggagt ttctagggtc
    1451  ttcaatgtat gatttaaatg atcaagaaaa acaaaatcca ataaatttca
    1501  ggtctggagc acaccctttc tttttcgaat tcgacccaga ctacaacccc
    1551  ataagagtga aaagacccaa aaaaccaata gcaaagagaa attcaaatat
    1601  cagcagattg gaagaagaag gaatggatga aaattcagag atcggacaag
    1651  ccaagaagat gaaacccttg gatcaattgg ccagcactag tagcaacatt
    1701  cctggagaaa attaaagtca gattaaattc atcacatatt ttatgatcaa
    1751  ctgttgtatt gttatatata taattcaaaa acctccttgc tactgct