Sequence of DPV Infectious pancreatic necrosis virus
Infectious pancreatic necrosis virus segment A RNA encoding a polyprotein, 3' end.
ACC No: M18049
Dated: 2002-03-06 | Length: 3097 | CRC: 943994060
!!NA_SEQUENCE 1.0
ID IPNAPP standard; RNA; VRL; 3097 BP.
XX
AC M18049; X04124;
XX
SV M18049.1
XX
DT 23-MAY-1995 (Rel. 43, Created)
DT 06-MAR-2002 (Rel. 71, Last updated, Version 6)
XX
DE Infectious pancreatic necrosis virus segment A RNA encoding a polyprotein,
DE 3' end.
XX
KW nonstructural protein; polyprotein; protease.
XX
OS Infectious pancreatic necrosis virus
OC Viruses; dsRNA viruses; Birnaviridae; Aquabirnavirus.
XX
RN [1]
RP 1-3097
RX MEDLINE; 86286599.
RX PUBMED; 3737418.
RA Duncan R., Dobos P.;
RT "The nucleotide sequence of infectious pancreatic necrosis virus (IPNV)
RT dsRNA segment A reveals one large ORF encoding a precursor polyprotein";
RL Nucleic Acids Res. 14(14):5934-5934(1986).
XX
RN [2]
RP 1416-3097
RX MEDLINE; 88062910.
RX PUBMED; 3316706.
RA Duncan R., Nagy E., Krell P.J., Dobos P.;
RT "Synthesis of the infectious pancreatic necrosis virus polyprotein,
RT detection of a virus-encoded protease, and fine structure mapping of genome
RT segment A coding regions";
RL J. Virol. 61(12):3655-3664(1987).
XX
DR SWISS-PROT; P05844; POLS_IPNVJ.
DR SWISS-PROT; P22931; YPOL_IPNVJ.
XX
CC On Feb 26, 2002 this sequence version replaced gi:60491.
CC Draft entry and computer-readable sequence for [2],[Nucleic Acids
CC Res. 14, 5934-5934 (1986)] kindly
CC provided by P.Krell, 23-FEB-1988.
CC The precise boundaries of the mature proteins have as yet not been
CC determined.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3097
FT /db_xref="taxon:11002"
FT /note="segment: A"
FT /organism="Infectious pancreatic necrosis virus"
FT /strain="Jasper"
FT CDS 68. .514
FT /codon_start=1
FT /db_xref="SWISS-PROT:P22931"
FT /note="putative"
FT /product="unknown protein"
FT /protein_id="AAA89178.1"
FT /translation="MAKALSNKQPTILIYMNHEHIQGNRNLLEIHYASREWASKHSGRH
FT NREAYTKTRDLVIQLRGIRIRKWASCLLPRSSWIQGRCPLQVESEPDGTRIRPVARDVT
FT GPKEGIQLRETDLTEIRHPELNPSRWSVCTQWDPERCHLRRKSV"
FT CDS 120. .3038
FT /codon_start=1
FT /db_xref="SWISS-PROT:P05844"
FT /product="polyprotein"
FT /protein_id="AAA89179.1"
FT /translation="MSTSKATATYLRSIMLPENGPASIPDDITERHILKQETSSYNLEV
FT SESGSGLLVCFPGAPGSRVGAHYRWNLNQTALEFDQWLETSQDLKKAFNYGRLISRKYD
FT IQSSTLPAGLYALNGTLNAATFEGSLSEVESLTYNSLMSLTTNPQDKVNNQLVTKGITV
FT LNLPTGFDKPYVRLEDETPQGPQSMNGARMRCTAAIAPRRYEIDLPSERLPTVAATGTP
FT TTIYEGNADIVNSTAVTGDITFQLEAEPVNETRFDFILQFLGLDNDVPVVTVTSSTLVT
FT ADNYRGASAKFTQSIPTEMITKPITRVKLAYQLNQQTAIANAATLGAKGPASVSFSSGN
FT GNVPGVLRPITLVAYEKMTPQSILTVAGVSNYELIPNPDLLKNMVTKYGKYDPEGLNYA
FT KMILSHREELDIRTVWRTEEYKERTRAFKEITDFTSDLPTSKAWGWRDLVRGIRKVAAP
FT VLSTLFPMAAPLIGAADQFIGDLTKTNSAGGRYLSHAAGGRYHDVMDSWASGSEAGSYS
FT KHLKTRLESNNYEEVELPKPTKGVIFPVVHTVESAPGEAFGSLVVVIPEAYPELLDPNQ
FT QVLSYFKNDTGCVWGIGEDIPFEGDDMCYTALPLKEIKRNGNIVVEKIFAGPAMGPSSQ
FT LALSLLVNDIDEGIPRMVFTGEIADDEETVIPICGVDIKAIAAHEHGLPLIGCQPGVDE
FT MVANTSLASHLIQGGALPVQKAQGACRRIKYLGQLMRTTASGMDAELQGLLQATMARAK
FT EVKDAEVFKLLKLMSWTRKNDLTDHMYEWSKEDPDAIKFGRLVSTPPKHQEKPKGPDQH
FT TAQEAKATRISLDAVKAGADFASPEWIAENNYRGPSPGQFKYYMITGRVPNPGEEYEDY
FT VRKPITRPTDMDKIRRLANSVYGLPHQEPAPDDFYQAVVEVFAENGGRGPDQDQMQDLR
FT DLARQMKRRPRPAETRRQTKTPPRAATSSGSRFTPSGDDGEV"
XX
SQ Sequence 3097 BP; 885 A; 904 C; 799 G; 509 T; 0 other;
M18049 Length: 3097 September 18, 2002 10:51 Type: N Check: 1346 ..
1 ggaaagagag tttcaacgtt agtggtaacc cacgagcgga gagctcttac
51 ggaggagctc tccgtcgatg gcgaaagccc tttctaacaa acaaccaaca
101 attcttatct acatgaatca tgagcacatc caaggcaacc gcaacctact
151 tgagatccat tatgcttccc gagaatgggc cagcaagcat tccggacgac
201 ataacagaga ggcatatact aaaacaagag acctcgtcat acaacttaga
251 ggtatccgaa tcaggaagtg ggcttcttgt ctgcttcccc ggagctcctg
301 gatccagggt cggtgcccac tacaggtgga atctgaacca gacggcacta
351 gaattcgacc agtggctaga gacgtcacag gacctaaaga aggcattcaa
401 ctacgggaga ctgatctcac ggaaatacga catccagagc tcaacccttc
451 ccgctggtct gtatgcactc aatgggaccc tgaacgctgc caccttcgaa
501 ggaagtctgt ctgaagtaga gagcctaacc tacaacagct tgatgtccct
551 aacaacaaac ccacaggaca aggtcaacaa tcaactagtg accaaaggaa
601 ttaccgtcct gaatctacca actgggtttg acaagccata cgtccgccta
651 gaggacgaga caccacaggg cccccagtcc atgaacggag caaggatgag
701 gtgcacagct gccatcgcac caaggaggta tgaaatcgac ctcccatccg
751 aacgactgcc gaccgtggcc gcgactggga ccccaacaac aatttatgag
801 gggaatgctg acatcgtgaa ctccacagca gtcaccgggg acataacatt
851 ccagctcgag gccgaacccg tcaatgagac acggttcgac ttcattctac
901 agttcctggg gctggacaac gacgtccccg tggttaccgt gacaagctcc
951 acgctagtca cagcggacaa ctacaggggg gcgtcagcca agttcaccca
1001 gtcaatccca acagaaatga ttaccaaacc aatcacacgg gtcaagctgg
1051 cctaccagct caaccagcag accgcaattg caaacgcagc aacgctcgga
1101 gccaaggggc cggcatcagt ctcattctca tccgggaacg gcaatgtgcc
1151 gggggtccta agacccataa ccctagtggc gtacgagaag atgacccccc
1201 agtcaatcct gaccgtggct ggcgtatcca actatgagct gatcccaaac
1251 ccagacctac tgaagaacat ggtcaccaag tatggaaagt atgaccctga
1301 gggcctcaac tatgccaaga tgatcctgtc ccacagagag gagctggaca
1351 ttagaaccgt ctggaggact gaggaataca aagaaaggac aagagcattc
1401 aaagagatca ctgacttcac aagtgaccta ccaacctcaa aggcatgggg
1451 atggagggac ctggtcagag gcatcagaaa agtggccgcc cccgtgctgt
1501 caacgctctt cccaatggcg gctcccctta taggagctgc cgaccaattc
1551 attggggacc tcaccaagac caactcagcc gggggacgct acctgtcaca
1601 cgcagccgga ggccgctacc atgatgtcat ggactcatgg gccagcgggt
1651 ccgaggcagg aagctattca aagcacctca agacccggct tgagtccaat
1701 aactatgagg aagtggagct tccaaagcca acaaagggag tcatctttcc
1751 tgtggtgcac accgttgaga gtgcaccagg tgaggccttc gggtcgctcg
1801 tggtagtaat accagaagcg tacccggaac ttcttgaccc aaaccaacag
1851 gtcctatcct acttcaagaa cgacacaggc tgcgtctggg ggataggaga
1901 agacatcccc tttgaaggag atgacatgtg ctacaccgca ctgcccctca
1951 aggagatcaa gaggaacgga aacatcgtgg tggagaaaat attcgctggc
2001 cccgcgatgg gaccgtcctc ccaacttgca ctgtccctgc tcgtcaacga
2051 catagacgaa gggattccaa ggatggtctt cacaggcgag attgccgatg
2101 acgaagaaac agtcatccca atctgcggag tggacatcaa agccatagcc
2151 gcccatgaac acgggctgcc cctcattggc tgtcagccag gggtcgacga
2201 gatggtggca aacacatctc tcgcatcaca cctgattcag ggcggggccc
2251 taccagtgca gaaagcacag ggcgcctgca ggagaatcaa gtacctgggc
2301 cagctgatga gaacaactgc atcagggatg gacgcagaac tgcaggggct
2351 gctgcaggcc accatggcca gagcaaaaga agtgaaggac gccgaagtgt
2401 tcaaacttct gaaactcatg tcatggacaa gaaagaacga cctcacagat
2451 cacatgtatg agtggtcaaa ggaggatcct gatgcaatca aatttggcag
2501 gctcgtcagc acccccccaa aacaccaaga gaagccaaaa ggacctgacc
2551 agcacaccgc ccaggaggca aaggccacca ggatttcact ggacgccgtc
2601 aaagccggcg cagactttgc ctccccagag tggatcgcgg agaacaacta
2651 ccgcggccca tccccaggcc agttcaagta ctacatgata acgggcagag
2701 tcccaaaccc cggagaagag tacgaggact atgtgcgaaa accgataacc
2751 cgaccaaccg acatggacaa aatcagacgc ctagccaaca gtgtctacgg
2801 cctgccccac caagaacccg caccagacga cttctaccag gcagtcgtcg
2851 aggtgttcgc agaaaacggg ggaagagggc ccgaccaaga ccaaatgcaa
2901 gacctgaggg acttggcaag gcagatgaaa cgacgacccc gaccagctga
2951 gacacgcagg caaaccaaga ctccacccag ggcggcaacc tccagtggat
3001 cgcggtttac cccctccggc gatgacggag aagtgtaaca gctactctct
3051 ttcctgactg atcccctggc cgtaaccccg gccccccagg gggcccc