Sequence of DPV Potato virus Y
Potato virus Y helper component mRNA, 5' end.
ACC No: M38377
Dated: 2000-03-04 | Length: 2748 | CRC: 1661349119
!!NA_SEQUENCE 1.0
ID PVYHELCO standard; RNA; VRL; 2748 BP.
XX
AC M38377; M37146;
XX
SV M38377.1
XX
DT 22-SEP-1990 (Rel. 25, Created)
DT 04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE Potato virus Y helper component mRNA, 5' end.
XX
KW helper component.
XX
OS Potato virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-2748
RA Thornbury D.W., Patterson C.A., Dessens J.T., Pirone T.P.;
RT ;
RL Unpublished.
XX
RN [2]
RP 944-2400
RX MEDLINE; 91020997.
RA Thornbury D.W., Patterson C.A., Dessens J.T., Pirone T.P.;
RT "Comparative sequence of the helper component (HC) region of potato virus Y
RT and a HC-defective strain, potato virus C";
RL Virology 178:573-578(1990).
XX
DR SWISS-PROT; P22601; POLG_PVYC.
XX
CC Draft entry and computer-readable sequence for [1] kindly submitted
CC by D.W.Thornbury, 25-JUL-1990.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2748
FT /db_xref="taxon:12216"
FT /organism="Potato virus Y"
FT CDS 180. .>2748
FT /codon_start=1
FT /db_xref="SWISS-PROT:P22601"
FT /note="helper component"
FT /protein_id="AAA47183.1"
FT /translation="MAIYMSTICFGSIECKLPYSPASCGHVTEEREVLASVEPFMDLEA
FT QLSARLLRQKHATVRVLKNGTCAYRYKTDAQIVRIQKKLERKERDEYHFQMAAPSIVSK
FT ITIAGGDPPSKYEPQTPKRVIHTTPRVRKVKKHSIIKLTESQMNHLIKQVKRIMSAKKG
FT SVHLINKKSTHVQYKEILGTTRAAVRTAHMMGLRRRVDFRCDMWTTERLKCLARTDKWS
FT NRVHTINIRKGDSGVILNADSLKGHFGRSSGGLFIVRGSHEGKLYDARSKVTQGVLNSM
FT VQFSNAENFWKGLDDNWARMRYPSDHTCIDGLPVEDCGRVAALMTHSILPCYEITCPTC
FT AQQYANLPASDLFKLLHKHARDGLSRLGSDKDRFVHVNKFLVALEHLTEPVDLNLELFN
FT EIFKSIGEKQQAPFKNLNVLNNFFLKGKENTAHEWQVAQLSLLELARFQKNRTDNIKKG
FT DISFFRNKLSAKANWNLYLSCDNQLDKNANFLWGQREYHAKRFFSNFFEEVDPAKGYSA
FT YEIRKHPNGTRKLSIGNLVVPLDLAEFRQKMKGDYRKQPGVSKRCTSSKDGNYVYPCCC
FT TTLDDGSAIESTFYPPTKKHLVIGNSGDQKYVDLPKGDSEMLYIAKQGYCYINVFLAML
FT INVSEEDAKDFTKKVRDMCVPKLGTWPTMMDLATTCAQMRIFYPDVHDAELPRILVDHD
FT TQTCHVVDSFGSQTTGYHILKASSVSQLILFANDELESEIKHYRVGGVPNACPELGSTI
FT SPFREGGVIMSESAALKLLLKGIFRPKVMRQLLLDEPHLLILSILSPGILMAMYNNGIF
FT ELAVRLWINEKQSIAMIASLLSALALRVSAAETLVAQRIIIDAA"
XX
SQ Sequence 2748 BP; 838 A; 538 C; 638 G; 734 T; 0 other;
M38377 Length: 2748 December 21, 2001 15:55 Type: N Check: 121 ..
1 aaacaactca atacaacata agaaaaacaa cgcaaaaaca cttacaaacg
51 ctcattttca ctcaagcaac ttgctaaatt tcagcttttg tctttttctt
101 gcgattctct ttaacgatat tgaaaaccgt cctagttcga caagctattt
151 cacttctacc aactattagc atattctcca tggcaatcta catgtcgaca
201 atctgtttcg gttcaattga atgtaaatta ccgtactcac ccgcctcttg
251 cggacatgtc actgaagagc gagaggtgtt ggcttctgtt gagcctttca
301 tggatctgga ggcacagctt agcgcacgat tactcaggca aaagcatgca
351 accgttcgtg tattgaagaa cggtacttgt gcgtatcgat acaagactga
401 cgcgcagata gtgcgtattc agaagaaatt ggagaggaaa gagagagatg
451 agtatcactt tcagatggcc gctccaagta ttgtgtcaaa gattactatt
501 gctggtggag atcccccatc gaagtatgag ccacaaacgc cgaaaagagt
551 cattcacacg actccaaggg tgcgtaaagt taagaaacac tccataataa
601 agttgacgga aagtcaaatg aatcacctta tcaagcaggt gaagcgaatt
651 atgtcagcta agaaagggtc tgtccaccta atcaataaga agagtacgca
701 tgttcaatat aaggagatac ttggaacaac tcgcgcggct gttcgtactg
751 cacatatgat gggtttgcga cgaagagtgg acttccgatg tgatatgtgg
801 acaaccgagc gtttgaaatg tctcgctcga acagataaat ggtcaaatcg
851 agttcacacc atcaacatac gaaagggcga tagtggagtc atcttgaacg
901 ctgacagcct caaaggtcac tttgggagaa gttcgggagg cttattcata
951 gtgcgtggat cacatgaagg gaaattgtat gacgcacgtt ccaaagttac
1001 tcagggtgtt ttgaactcga tggttcagtt ctcgaatgct gagaattttt
1051 ggaagggtct ggacgacaac tgggcacgaa tgagataccc ttcagatcat
1101 acatgtatag atggtttacc agtcgaggac tgcggtaggg tcgctgcatt
1151 gatgacacac agcattctgc cgtgttacga gataacctgc cccacctgcg
1201 ctcaacaata tgccaacttg ccagccagcg atctgttcaa gctgctgcat
1251 aaacatgcaa gggatggttt gagtcgattg ggatcggata aagacagatt
1301 tgtgcatgtt aataagttct tggtagcgtt ggagcatcta actgaaccag
1351 ttgatttgaa tctcgagctt ttcaatgaga tatttaaatc cataggggag
1401 aagcagcaag caccattcaa gaatttgaat gtcttaaaca atttctttct
1451 aaaaggaaaa gaaaatacag ctcatgaatg gcaggtggct caattgagtt
1501 tgctcgaatt agcaaggttc cagaagaata gaactgataa catcaagaaa
1551 ggtgacatat ctttcttcag gaataaacta tctgccaaag caaactggaa
1601 tctgtatttg tcgtgcgaca atcagttgga taaaaatgca aacttcttgt
1651 ggggacaaag ggagtatcat gctaagcggt ttttctcaaa cttctttgag
1701 gaagttgatc cagcaaaggg atactcagca tatgaaatcc gcaagcatcc
1751 gaatggaact aggaagctct caattggtaa cttggttgtc ccacttgatt
1801 tagctgagtt tagacagaag atgaaaggtg actataggaa acaaccaggg
1851 gtcagcaaaa ggtgcacgag ttcgaaagat ggtaattatg tgtatccctg
1901 ctgttgcaca acacttgacg atggctcagc cattgaatca acattctatc
1951 cgccaactaa aaagcacctt gtaataggca atagtggtga ccaaaaatat
2001 gttgatttac caaaagggga ttcggagatg ttgtacatcg ccaagcaagg
2051 ttattgctat atcaacgtat ttcttgcaat gctgattaac gtcagcgagg
2101 aggacgcgaa ggatttcaca aagaaagttc gcgacatgtg tgtgccaaag
2151 cttggaacct ggccaactat gatggatttg gcgactactt gtgctcaaat
2201 gagaatattc tatcctgacg tgcatgatgc agaactgccc agaatattag
2251 ttgaccatga cactcaaacg tgtcacgtgg ttgactcttt tggttcgcaa
2301 acaactgggt atcatattct aaaagcatct agtgtgtctc aacttatctt
2351 gtttgcaaat gatgagttag aatctgaaat aaaacactat agagttggtg
2401 gtgttcctaa tgcatgccct gaacttgggt ccacaatatc acctttcaga
2451 gaaggaggag ttataatgtc tgagtcggca gcgctaaaac tgcttctaaa
2501 ggggattttc agacctaagg tgatgagaca gttgctgttg gatgagcctc
2551 acctattgat tctatcaata ttatcccctg gcatactgat ggctatgtat
2601 aataatggga tttttgaact tgcggtgagg ttgtggatta atgagaaaca
2651 atctatagcc atgatagcat cgttgctgtc agctttagct ctacgagtgt
2701 cagcggcaga aacactcgtc gcacagagga tcataattga tgctgcag