Sequence of DPV Rotavirus B

Adult diarrheal rotavirus (group B) segment 5 major inner capsid protein gene, complete cds.

ACC No: M55982

Dated: 2000-03-04 | Length: 1269 | CRC: -343982464

                !!NA_SEQUENCE 1.0
ID   ROTMICP    standard; RNA; VRL; 1269 BP.
XX
AC   M55982;
XX
SV   M55982.1
XX
DT   07-DEC-1991 (Rel. 30, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Adult diarrheal rotavirus (group B) segment 5 major inner capsid protein
DE   gene, complete cds.
XX
KW   major inner capsid protein.
XX
OS   group B rotavirus
OC   Viruses; dsRNA viruses; Reoviridae; Rotavirus; Group B rotaviruses.
XX
RN   [1]
RP   1-1269
RX   MEDLINE; 91220732.
RA   Chen G.-M., Werner-Eckert R., Mackow E.R., Tao H.;
RT   "Expression of the major inner capsid protein of the group B rotavirus
RT   ADRV: primary characterization of genome segment 5";
RL   Virology 182:820-829(1991).
XX
DR   SWISS-PROT; P26015; VS06_ROTGA.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1269
FT                   /db_xref="taxon:10974"
FT                   /organism="group B rotavirus"
FT                   /strain="Adult diarrheal rotavirus"
FT   stem_loop       1. .1269
FT   CDS             31. .1206
FT                   /codon_start=1
FT                   /db_xref="SWISS-PROT:P26015"
FT                   /product="major inner capsid protein"
FT                   /gene="major inner capsid protein"
FT                   /protein_id="AAA47353.1"
FT                   /translation="MDLIETVNACVKLQKRVLGLAPNTNLNTAEQSVLNDYNALPSRVN
FT                   GKTYALLNQIAVYTPYTINAPIISLAVRISTDDYDDMRSGIESILDVLAAAIRTEGSRP
FT                   TRVIERRVLEQNVKQLVDDLRLKSLISDLSIANLAAVDTAMIQPEVIETENPLYADIIE
FT                   QIVHRPNIGMNGGNIRATLGRWSGNKGVVTCMSGMDSEHRFTVELKTRTCGIINIVYIP
FT                   TAGTILIPMPAGRNREGDLIDVSAEMMADDFAIDFMDDDKIIQTETGVGVYSFPMCNRI
FT                   RFRINPWNTQKDDDNLGTVHMINWAQGTAPKQPAISFMFETRRTFTEGNYQHLSRCAPK
FT                   AQYMMDTQFNDVSFTNRPAVDWNIQSLLTSNTQRVWCQKIAMLIAAFAAKI"
XX
SQ   Sequence 1269 BP; 418 A; 231 C; 272 G; 348 T; 0 other;

M55982  Length: 1269  December 21, 2001 15:55  Type: N  Check: 3542  ..

       1  ggtttaaata gcccaaccgg tgattcaagc atggatctga tcgagacagt
      51  gaacgcgtgc gtaaaattgc aaaaacgagt acttggttta gctccaaata
     101  cgaatttaaa tacagctgaa caaagcgtgt taaatgatta caacgcactg
     151  ccttctcgag tgaacggaaa aacgtatgca ttgctgaatc agatagccgt
     201  ttacactcct tataccataa atgcgccaat tatatctctg gctgtacgaa
     251  tctctactga tgattacgat gatatgcgat ctgggattga atctatctta
     301  gacgtgttgg ctgctgctat tcgaactgaa ggatcacggc ctacacgagt
     351  gattgaaaga cgcgttttgg aacaaaatgt taaacaattg gttgacgatt
     401  tacgtttgaa aagtctcatt tctgatttat caatcgcaaa tttagccgcc
     451  gtcgacactg caatgataca acctgaagtg attgaaactg aaaatcctct
     501  ttatgcagac ataattgaac agatagttca tagaccgaat ataggtatga
     551  atggtggaaa tattagagcc actcttggta ggtggtcagg taataaaggg
     601  gttgtaactt gtatgtcagg tatggattct gaacatagat ttacagtaga
     651  actcaaaaca cgcacttgcg gaataattaa catcgtctac atacctacag
     701  ctggaaccat actaattccg atgcctgccg gtagaaatag agaaggtgat
     751  ttaatagatg tatcagctga aatgatggca gatgattttg ctatagattt
     801  tatggacgat gataaaatta ttcaaactga gactggagtt ggagtgtatt
     851  cctttcctat gtgcaatagg atcagattta gaataaatcc atggaatacc
     901  caaaaggatg atgataattt aggaacggtg catatgatca attgggctca
     951  agggactgct ccaaagcagc cagctatatc ttttatgttt gaaactcgtc
    1001  gaacgtttac agaaggaaac tatcaacatt tgtcaagatg cgctcctaaa
    1051  gcgcaataca tgatggacac gcagttcaat gacgtttctt ttacgaatag
    1101  accagctgta gactggaata ttcaaagtct gctcacatca aatactcaac
    1151  gagtgtggtg tcaaaaaata gcgatgctta ttgccgcgtt cgctgccaag
    1201  atctagatcg acatcggatc caaaaaaagg attgcttcga aaggtgcgaa
    1251  aaaataagca ataaaaccc